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    TUB tubby bipartite transcription factor [ Canis lupus familiaris (dog) ]

    Gene ID: 485377, updated on 26-Sep-2018

    Summary

    Official Symbol
    TUBprovided by VGNC
    Official Full Name
    tubby bipartite transcription factorprovided by VGNC
    Primary source
    VGNC:VGNC:47986
    See related
    Ensembl:ENSCAFG00000006892
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs

    Genomic context

    See TUB in Genome Data Viewer
    Location:
    chromosome: 21
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    105 current CanFam3.1 (GCF_000002285.3) 21 NC_006603.3 (31566095..31629545)

    Chromosome 21 - NC_006603.3Genomic Context describing neighboring genes Neighboring gene cOR10A3 olfactory receptor family 10 subfamily A-like Neighboring gene NLR family pyrin domain containing 10 Neighboring gene eukaryotic translation initiation factor 3 subunit F Neighboring gene RIC3 acetylcholine receptor chaperone Neighboring gene LIM domain only 1 Neighboring gene uncharacterized LOC106560205

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_006603.3 Chromosome 21 Reference CanFam3.1 Primary Assembly

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    General gene information

    Homology

    General protein information

    Preferred Names
    tubby protein homolog
    Names
    tubby homolog

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 105 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference CanFam3.1 Primary Assembly

    Genomic

    1. NC_006603.3 Reference CanFam3.1 Primary Assembly

      Range
      31566095..31629545
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005633627.3XP_005633684.1  tubby protein homolog isoform X6

      Conserved Domains (2) summary
      pfam01167
      Location:228469
      Tub; Tub family
      pfam16322
      Location:55207
      Tub_N; Tubby N-terminal
    2. XM_005633626.3XP_005633683.1  tubby protein homolog isoform X5

      Conserved Domains (2) summary
      pfam01167
      Location:236477
      Tub; Tub family
      pfam16322
      Location:55215
      Tub_N; Tubby N-terminal
    3. XM_022407797.1XP_022263505.1  tubby protein homolog isoform X2

      Related
      ENSCAFP00000010262.3, ENSCAFT00000011073.4
      Conserved Domains (2) summary
      pfam01167
      Location:268509
      Tub; Tub family
      pfam16322
      Location:39247
      Tub_N; Tubby N-terminal
    4. XM_005633625.3XP_005633682.1  tubby protein homolog isoform X3

      Conserved Domains (2) summary
      pfam01167
      Location:260501
      Tub; Tub family
      pfam16322
      Location:31239
      Tub_N; Tubby N-terminal
    5. XM_014122705.2XP_013978180.1  tubby protein homolog isoform X4

      Related
      ENSCAFP00000041177.1, ENSCAFT00000044088.1
      Conserved Domains (2) summary
      pfam01167
      Location:250491
      Tub; Tub family
      pfam16322
      Location:21229
      Tub_N; Tubby N-terminal
    6. XM_014122704.2XP_013978179.1  tubby protein homolog isoform X1

      Conserved Domains (2) summary
      pfam01167
      Location:271512
      Tub; Tub family
      pfam16322
      Location:42250
      Tub_N; Tubby N-terminal
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