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    RSPRY1 ring finger and SPRY domain containing 1 [ Pan troglodytes (chimpanzee) ]

    Gene ID: 454113, updated on 23-Mar-2018

    Summary

    Official Symbol
    RSPRY1provided by VGNC
    Official Full Name
    ring finger and SPRY domain containing 1provided by VGNC
    Primary source
    VGNC:VGNC:9102
    See related
    Ensembl:ENSPTRG00000008149
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Pan troglodytes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
    Orthologs

    Genomic context

    See RSPRY1 in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    105 current Clint_PTRv2 (GCF_002880755.1) 16 NC_036895.1 (42282670..42334059)
    103 previous assembly Pan_troglodytes-2.1.4 (GCF_000001515.6) 16 NC_006483.3 (56270336..56322321)

    Chromosome 16 - NC_036895.1Genomic Context describing neighboring genes Neighboring gene cilia- and flagella-associated protein 69-like Neighboring gene NLR family CARD domain containing 5 Neighboring gene copine 2 Neighboring gene family with sequence similarity 192 member A Neighboring gene ADP ribosylation factor like GTPase 2 binding protein Neighboring gene plasmolipin

    Genomic regions, transcripts, and products

    Expression

    • Project title: Tissue-specific RNA-sequencing for ten non-human primate species
    • Description: Total RNA sequencing of fifteen different tissues for ten non-human primates
    • BioProject: PRJNA271912
    • Publication: PMID 25392405
    • Analysis date: Tue Apr 3 07:13:10 2018

    General gene information

    Markers

    Homology

    General protein information

    Preferred Names
    RING finger and SPRY domain-containing protein 1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001280479.1NP_001267408.1  RING finger and SPRY domain-containing protein 1 precursor

      See identical proteins and their annotated locations for NP_001267408.1

      Status: PROVISIONAL

      Source sequence(s)
      AK304933
      UniProtKB/TrEMBL
      G2HDW9
      Related
      ENSPTRP00000013916.4, ENSPTRT00000015028.5
      Conserved Domains (3) summary
      pfam13920
      Location:523568
      zf-C3HC4_3; Zinc finger, C3HC4 type (RING finger)
      sd00044
      Location:108133
      HEAT; HEAT repeat [structural motif]
      cd12883
      Location:359479
      SPRY_RING; SPRY domain at N-terminus of Really Interesting New Gene (RING) finger domain

    RefSeqs of Annotated Genomes: Pan troglodytes Annotation Release 105 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Clint_PTRv2 Primary Assembly

    Genomic

    1. NC_036895.1 Reference Clint_PTRv2 Primary Assembly

      Range
      42282670..42334059
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_016928470.1XP_016783959.1  RING finger and SPRY domain-containing protein 1 isoform X1

      UniProtKB/TrEMBL
      H2QB64
      Conserved Domains (2) summary
      cd12883
      Location:359479
      SPRY_RING; SPRY domain at N-terminus of Really Interesting New Gene (RING) finger domain
      cd16566
      Location:525565
      RING-HC_RSPRY1; RING finger, HC subclass, found in RING finger and SPRY domain-containing protein 1 (RSPRY1) and similar proteins
    2. XM_009430832.2XP_009429107.1  RING finger and SPRY domain-containing protein 1 isoform X1

      See identical proteins and their annotated locations for XP_009429107.1

      UniProtKB/TrEMBL
      H2QB64
      Conserved Domains (2) summary
      cd12883
      Location:359479
      SPRY_RING; SPRY domain at N-terminus of Really Interesting New Gene (RING) finger domain
      cd16566
      Location:525565
      RING-HC_RSPRY1; RING finger, HC subclass, found in RING finger and SPRY domain-containing protein 1 (RSPRY1) and similar proteins
    3. XM_009430830.2XP_009429105.1  RING finger and SPRY domain-containing protein 1 isoform X1

      See identical proteins and their annotated locations for XP_009429105.1

      UniProtKB/TrEMBL
      H2QB64
      Conserved Domains (2) summary
      cd12883
      Location:359479
      SPRY_RING; SPRY domain at N-terminus of Really Interesting New Gene (RING) finger domain
      cd16566
      Location:525565
      RING-HC_RSPRY1; RING finger, HC subclass, found in RING finger and SPRY domain-containing protein 1 (RSPRY1) and similar proteins
    4. XM_009430831.3XP_009429106.1  RING finger and SPRY domain-containing protein 1 isoform X1

      See identical proteins and their annotated locations for XP_009429106.1

      UniProtKB/TrEMBL
      H2QB64
      Conserved Domains (2) summary
      cd12883
      Location:359479
      SPRY_RING; SPRY domain at N-terminus of Really Interesting New Gene (RING) finger domain
      cd16566
      Location:525565
      RING-HC_RSPRY1; RING finger, HC subclass, found in RING finger and SPRY domain-containing protein 1 (RSPRY1) and similar proteins
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