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    CAT catalase [ Pan troglodytes (chimpanzee) ]

    Gene ID: 451116, updated on 23-Mar-2018

    Summary

    Official Symbol
    CATprovided by VGNC
    Official Full Name
    catalaseprovided by VGNC
    Primary source
    VGNC:VGNC:3174
    See related
    Ensembl:ENSPTRG00000003496
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pan troglodytes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
    Orthologs

    Genomic context

    See CAT in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    105 current Clint_PTRv2 (GCF_002880755.1) 11 NC_036890.1 (34147755..34181342)
    103 previous assembly Pan_troglodytes-2.1.4 (GCF_000001515.6) 11 NC_006478.3 (34420958..34454531)

    Chromosome 11 - NC_036890.1Genomic Context describing neighboring genes Neighboring gene ankyrin repeat and BTB domain containing 2 Neighboring gene methylmalonic aciduria and homocystinuria type D protein, mitochondrial pseudogene Neighboring gene uncharacterized LOC104008461 Neighboring gene corepressor interacting with RBPJ 1-like Neighboring gene E74 like ETS transcription factor 5 Neighboring gene ETS homologous factor

    Genomic regions, transcripts, and products

    Expression

    • Project title: Tissue-specific RNA-sequencing for ten non-human primate species
    • Description: Total RNA sequencing of fifteen different tissues for ten non-human primates
    • BioProject: PRJNA271912
    • Publication: PMID 25392405
    • Analysis date: Tue Apr 3 07:13:10 2018

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Pathways from BioSystems

    • Amyotrophic lateral sclerosis (ALS), organism-specific biosystem (from KEGG)
      Amyotrophic lateral sclerosis (ALS), organism-specific biosystemAmyotrophic lateral sclerosis (ALS) is a progressive, lethal, degenerative disorder of motor neurons. The hallmark of this disease is the selective death of motor neurons in the brain and spinal cord...
    • Amyotrophic lateral sclerosis (ALS), conserved biosystem (from KEGG)
      Amyotrophic lateral sclerosis (ALS), conserved biosystemAmyotrophic lateral sclerosis (ALS) is a progressive, lethal, degenerative disorder of motor neurons. The hallmark of this disease is the selective death of motor neurons in the brain and spinal cord...
    • Carbon metabolism, organism-specific biosystem (from KEGG)
      Carbon metabolism, organism-specific biosystemCarbon metabolism is the most basic aspect of life. This map presents an overall view of central carbon metabolism, where the number of carbons is shown for each compound denoted by a circle, excludi...
    • Carbon metabolism, conserved biosystem (from KEGG)
      Carbon metabolism, conserved biosystemCarbon metabolism is the most basic aspect of life. This map presents an overall view of central carbon metabolism, where the number of carbons is shown for each compound denoted by a circle, excludi...
    • FoxO signaling pathway, organism-specific biosystem (from KEGG)
      FoxO signaling pathway, organism-specific biosystemThe forkhead box O (FOXO) family of transcription factors regulates the expression of genes in cellular physiological events including apoptosis, cell-cycle control, glucose metabolism, oxidative str...
    • Glyoxylate and dicarboxylate metabolism, organism-specific biosystem (from KEGG)
      Glyoxylate and dicarboxylate metabolism, organism-specific biosystem
      Glyoxylate and dicarboxylate metabolism
    • Glyoxylate and dicarboxylate metabolism, conserved biosystem (from KEGG)
      Glyoxylate and dicarboxylate metabolism, conserved biosystem
      Glyoxylate and dicarboxylate metabolism
    • Longevity regulating pathway, organism-specific biosystem (from KEGG)
      Longevity regulating pathway, organism-specific biosystemRegulation of longevity depends on genetic and environmental factors. Caloric restriction (CR), that is limiting food intake, is recognized in mammals as the best characterized and most reproducible ...
    • Longevity regulating pathway - multiple species, organism-specific biosystem (from KEGG)
      Longevity regulating pathway - multiple species, organism-specific biosystemAging is a complex process of accumulation of molecular, cellular, and organ damage, leading to loss of function and increased vulnerability to disease and death. Despite the complexity of aging, rec...
    • Longevity regulating pathway - multiple species, conserved biosystem (from KEGG)
      Longevity regulating pathway - multiple species, conserved biosystemAging is a complex process of accumulation of molecular, cellular, and organ damage, leading to loss of function and increased vulnerability to disease and death. Despite the complexity of aging, rec...
    • Peroxisome, organism-specific biosystem (from KEGG)
      Peroxisome, organism-specific biosystemPeroxisomes are essential organelles that play a key role in redox signalling and lipid homeostasis. They contribute to many crucial metabolic processes such as fatty acid oxidation, biosynthesis of ...
    • Peroxisome, conserved biosystem (from KEGG)
      Peroxisome, conserved biosystemPeroxisomes are essential organelles that play a key role in redox signalling and lipid homeostasis. They contribute to many crucial metabolic processes such as fatty acid oxidation, biosynthesis of ...
    • Tryptophan metabolism, organism-specific biosystem (from KEGG)
      Tryptophan metabolism, organism-specific biosystem
      Tryptophan metabolism
    • Tryptophan metabolism, conserved biosystem (from KEGG)
      Tryptophan metabolism, conserved biosystem
      Tryptophan metabolism

    General gene information

    Markers

    Homology

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Pan troglodytes Annotation Release 105 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Clint_PTRv2 Primary Assembly

    Genomic

    1. NC_036890.1 Reference Clint_PTRv2 Primary Assembly

      Range
      34147755..34181342
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001147928.5XP_001147928.1  catalase

      See identical proteins and their annotated locations for XP_001147928.1

      UniProtKB/TrEMBL
      H2Q3E5
      Related
      ENSPTRP00000006074.3
      Conserved Domains (1) summary
      cd08156
      Location:68497
      catalase_clade_3; Clade 3 of the heme-binding enzyme catalase
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