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    TMEM80 transmembrane protein 80 [ Pan troglodytes (chimpanzee) ]

    Gene ID: 450931, updated on 3-Apr-2018

    Summary

    Official Symbol
    TMEM80provided by VGNC
    Official Full Name
    transmembrane protein 80provided by VGNC
    Primary source
    VGNC:VGNC:13387
    See related
    Ensembl:ENSPTRG00000003130
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pan troglodytes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
    Orthologs

    Genomic context

    See TMEM80 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    105 current Clint_PTRv2 (GCF_002880755.1) 11 NC_036890.1 (602899..613482)
    103 previous assembly Pan_troglodytes-2.1.4 (GCF_000001515.6) 11 NC_006478.3 (745245..756543)

    Chromosome 11 - NC_036890.1Genomic Context describing neighboring genes Neighboring gene secretin Neighboring gene dopamine receptor D4 Neighboring gene DEAF1 transcription factor Neighboring gene uncharacterized LOC104008370 Neighboring gene EPS8 like 2 Neighboring gene transaldolase 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: Tissue-specific RNA-sequencing for ten non-human primate species
    • Description: Total RNA sequencing of fifteen different tissues for ten non-human primates
    • BioProject: PRJNA271912
    • Publication: PMID 25392405
    • Analysis date: Tue Apr 3 07:13:10 2018

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    General gene information

    Markers

    Homology

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Pan troglodytes Annotation Release 105 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Clint_PTRv2 Primary Assembly

    Genomic

    1. NC_036890.1 Reference Clint_PTRv2 Primary Assembly

      Range
      602899..613482
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024346871.1XP_024202639.1  transmembrane protein 80 isoform X2

      Conserved Domains (1) summary
      pfam09799
      Location:97200
      Transmemb_17; Predicted membrane protein
    2. XM_009459650.2XP_009457925.1  transmembrane protein 80 isoform X3

      See identical proteins and their annotated locations for XP_009457925.1

      Related
      ENSPTRP00000068889.1, ENSPTRT00000082904.1
    3. XM_009459649.3XP_009457924.1  transmembrane protein 80 isoform X1

      Conserved Domains (1) summary
      pfam09799
      Location:89192
      Transmemb_17; Predicted membrane protein
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