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    CENPC centromere protein C [ Bos taurus (cattle) ]

    Gene ID: 450214, updated on 27-Aug-2018

    Summary

    Official Symbol
    CENPCprovided by VGNC
    Official Full Name
    centromere protein Cprovided by VGNC
    Primary source
    VGNC:VGNC:27174
    See related
    BGD:BT20982; Ensembl:ENSBTAG00000001323
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    CENPC1
    Orthologs

    Genomic context

    See CENPC in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    106 current ARS-UCD1.2 (GCF_002263795.1) 6 NC_037333.1 (83183412..83277556, complement)
    105 previous assembly Bos_taurus_UMD_3.1.1 (GCF_000003055.6) 6 AC_000163.1 (84904995..84998871, complement)

    Chromosome 6 - NC_037333.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112447018 Neighboring gene 60S ribosomal protein L10a pseudogene Neighboring gene signal transducing adaptor family member 1 Neighboring gene ubiquitin like modifier activating enzyme 6

    Genomic regions, transcripts, and products

    Pathways from BioSystems

    General gene information

    Markers

    Homology

    Clone Names

    • MGC128569

    General protein information

    Preferred Names
    centromere protein C
    Names
    centromere protein C 1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001045881.2NP_001039346.2  centromere protein C

      See identical proteins and their annotated locations for NP_001039346.2

      Status: VALIDATED

      Source sequence(s)
      BC105482
      UniProtKB/TrEMBL
      E1BAK5, Q2KJ76
      Related
      ENSBTAP00000001748.4, ENSBTAT00000001748.4
      Conserved Domains (3) summary
      pfam11699
      Location:857941
      CENP-C_C; Mif2/CENP-C like
      pfam15620
      Location:299560
      CENP-C_mid; Centromere assembly component CENP-C middle DNMT3B-binding region
      pfam15622
      Location:7293
      CENP_C_N; Kinetochore assembly subunit CENP-C N-terminal

    RefSeqs of Annotated Genomes: Bos taurus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD1.2 Primary Assembly

    Genomic

    1. NC_037333.1 Reference ARS-UCD1.2 Primary Assembly

      Range
      83183412..83277556 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005208030.4XP_005208087.1  centromere protein C isoform X1

      Conserved Domains (3) summary
      pfam11699
      Location:858942
      CENP-C_C; Mif2/CENP-C like
      pfam15620
      Location:300561
      CENP-C_mid; Centromere assembly component CENP-C middle DNMT3B-binding region
      pfam15622
      Location:7294
      CENP_C_N; Kinetochore assembly subunit CENP-C N-terminal
    2. XM_024993080.1XP_024848848.1  centromere protein C isoform X3

      Conserved Domains (3) summary
      pfam11699
      Location:742826
      CENP-C_C; Mif2/CENP-C like
      pfam15620
      Location:300547
      CENP-C_mid; Centromere assembly component CENP-C middle DNMT3B-binding region
      pfam15622
      Location:7294
      CENP_C_N; Kinetochore assembly subunit CENP-C N-terminal
    3. XM_010806157.3XP_010804459.1  centromere protein C isoform X2

      Conserved Domains (3) summary
      pfam11699
      Location:815899
      CENP-C_C; Mif2/CENP-C like
      pfam15620
      Location:300561
      CENP-C_mid; Centromere assembly component CENP-C middle DNMT3B-binding region
      pfam15622
      Location:7294
      CENP_C_N; Kinetochore assembly subunit CENP-C N-terminal
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