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    TUB tubby bipartite transcription factor [ Gallus gallus (chicken) ]

    Gene ID: 423061, updated on 7-Jul-2018

    Summary

    Symbol
    TUBprovided by CGNC
    Full Name
    tubby bipartite transcription factorprovided by CGNC
    Primary source
    CGNC:4480
    See related
    Ensembl:ENSGALG00000005986
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs

    Genomic context

    See TUB in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    104 current GRCg6a (GCF_000002315.5) 5 NC_006092.5 (10448593..10578961, complement)
    103 previous assembly Gallus_gallus-5.0 (GCF_000002315.4) 5 NC_006092.4 (10189874..10320245, complement)

    Chromosome 5 - NC_006092.5Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107053386 Neighboring gene RIC3 acetylcholine receptor chaperone Neighboring gene microRNA 1463 Neighboring gene RAS related 2 Neighboring gene uncharacterized LOC107053380

    Genomic regions, transcripts, and products

    General gene information

    Homology

    General protein information

    Preferred Names
    tubby protein homolog
    Names
    tubby homolog

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCg6a Primary Assembly

    Genomic

    1. NC_006092.5 Reference GRCg6a Primary Assembly

      Range
      10448593..10578961 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_025151383.1XP_025007151.1  tubby protein homolog isoform X3

      Conserved Domains (2) summary
      pfam01167
      Location:453693
      Tub; Tub family
      pfam16322
      Location:204434
      Tub_N; Tubby N-terminal
    2. XM_025151385.1XP_025007153.1  tubby protein homolog isoform X5

      Conserved Domains (2) summary
      pfam01167
      Location:453693
      Tub; Tub family
      pfam16322
      Location:204434
      Tub_N; Tubby N-terminal
    3. XM_015286499.1XP_015141985.1  tubby protein homolog isoform X8

      Conserved Domains (2) summary
      pfam01167
      Location:283523
      Tub; Tub family
      pfam16322
      Location:35264
      Tub_N; Tubby N-terminal
    4. XM_015286497.2XP_015141983.1  tubby protein homolog isoform X7

      Conserved Domains (2) summary
      pfam01167
      Location:284524
      Tub; Tub family
      pfam16322
      Location:35265
      Tub_N; Tubby N-terminal
    5. XM_015286500.1XP_015141986.1  tubby protein homolog isoform X9

      Conserved Domains (2) summary
      pfam01167
      Location:278518
      Tub; Tub family
      pfam16322
      Location:29259
      Tub_N; Tubby N-terminal
    6. XM_025151386.1XP_025007154.1  tubby protein homolog isoform X6

      Conserved Domains (2) summary
      pfam01167
      Location:407647
      Tub; Tub family
      pfam16322
      Location:204388
      Tub_N; Tubby N-terminal
    7. XM_025151382.1XP_025007150.1  tubby protein homolog isoform X2

      Conserved Domains (2) summary
      pfam01167
      Location:452692
      Tub; Tub family
      pfam16322
      Location:204433
      Tub_N; Tubby N-terminal
    8. XM_025151381.1XP_025007149.1  tubby protein homolog isoform X1

      Conserved Domains (2) summary
      pfam01167
      Location:453693
      Tub; Tub family
      pfam16322
      Location:204434
      Tub_N; Tubby N-terminal
    9. XM_025151387.1XP_025007155.1  tubby protein homolog isoform X10

      Conserved Domains (2) summary
      pfam01167
      Location:407647
      Tub; Tub family
      pfam16322
      Location:204388
      Tub_N; Tubby N-terminal
    10. XM_025151384.1XP_025007152.1  tubby protein homolog isoform X4

      Conserved Domains (2) summary
      pfam01167
      Location:452692
      Tub; Tub family
      pfam16322
      Location:204433
      Tub_N; Tubby N-terminal

    RNA

    1. XR_003075522.1 RNA Sequence

    2. XR_003075521.1 RNA Sequence

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