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    RBBP5 RB binding protein 5, histone lysine methyltransferase complex subunit [ Gallus gallus (chicken) ]

    Gene ID: 419826, updated on 7-Jul-2018

    Summary

    Symbol
    RBBP5provided by CGNC
    Full Name
    RB binding protein 5, histone lysine methyltransferase complex subunitprovided by CGNC
    Primary source
    CGNC:422
    See related
    Ensembl:ENSGALG00000000668
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs

    Genomic context

    See RBBP5 in Genome Data Viewer
    Location:
    chromosome: 26
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    104 current GRCg6a (GCF_000002315.5) 26 NC_006113.5 (2014209..2023539, complement)
    103 previous assembly Gallus_gallus-5.0 (GCF_000002315.4) 26 NC_006113.4 (2002933..2012316, complement)

    Chromosome 26 - NC_006113.5Genomic Context describing neighboring genes Neighboring gene contactin 2 Neighboring gene transmembrane protein 81 Neighboring gene dual serine/threonine and tyrosine protein kinase Neighboring gene transmembrane and coiled-coil domain family 2

    Genomic regions, transcripts, and products

    General gene information

    Homology

    General protein information

    Preferred Names
    retinoblastoma-binding protein 5
    Names
    retinoblastoma binding protein 5

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001030914.2NP_001026085.1  retinoblastoma-binding protein 5

      See identical proteins and their annotated locations for NP_001026085.1

      Status: PROVISIONAL

      Source sequence(s)
      AJ719611
      UniProtKB/TrEMBL
      Q5ZLX3
      Related
      ENSGALP00000000941.4, ENSGALT00000000943.5
      Conserved Domains (3) summary
      COG2319
      Location:38321
      WD40; WD40 repeat [General function prediction only]
      sd00039
      Location:2964
      7WD40; WD40 repeat [structural motif]
      cl02567
      Location:30322
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCg6a Primary Assembly

    Genomic

    1. NC_006113.5 Reference GRCg6a Primary Assembly

      Range
      2014209..2023539 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015298923.2XP_015154409.1  retinoblastoma-binding protein 5 isoform X4

      Conserved Domains (3) summary
      COG2319
      Location:38321
      WD40; WD40 repeat [General function prediction only]
      sd00039
      Location:2964
      7WD40; WD40 repeat [structural motif]
      cl02567
      Location:30322
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    2. XM_015298922.2XP_015154408.1  retinoblastoma-binding protein 5 isoform X3

      Conserved Domains (3) summary
      COG2319
      Location:38321
      WD40; WD40 repeat [General function prediction only]
      sd00039
      Location:2964
      7WD40; WD40 repeat [structural motif]
      cl02567
      Location:30322
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    3. XM_015298921.2XP_015154407.1  retinoblastoma-binding protein 5 isoform X1

      Conserved Domains (3) summary
      COG2319
      Location:38321
      WD40; WD40 repeat [General function prediction only]
      sd00039
      Location:2964
      7WD40; WD40 repeat [structural motif]
      cl02567
      Location:30322
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    4. XM_025143689.1XP_024999457.1  retinoblastoma-binding protein 5 isoform X2

      Conserved Domains (3) summary
      COG2319
      Location:13296
      WD40; WD40 repeat [General function prediction only]
      PTZ00441
      Location:315473
      PTZ00441; sporozoite surface protein 2 (SSP2); Provisional
      sd00039
      Location:439
      7WD40; WD40 repeat [structural motif]
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