Format

Send to:

Choose Destination
    • Showing Current items.

    GXYLT1 glucoside xylosyltransferase 1 [ Gallus gallus (chicken) ]

    Gene ID: 417789, updated on 18-Feb-2019

    Summary

    Symbol
    GXYLT1provided by CGNC
    Full Name
    glucoside xylosyltransferase 1provided by CGNC
    Primary source
    CGNC:7254
    See related
    Ensembl:ENSGALG00000009532
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    GLT8D3
    Orthologs

    Genomic context

    See GXYLT1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    104 current GRCg6a (GCF_000002315.5) 1 NC_006088.5 (29589322..29620400, complement)
    103 previous assembly Gallus_gallus-5.0 (GCF_000002315.4) 1 NC_006088.4 (29464170..29495248, complement)
    102 previous assembly Gallus_gallus-4.0 (GCF_000002315.3) 1 NC_006088.3 (29410642..29441660, complement)

    Chromosome 1 - NC_006088.5Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112533217 Neighboring gene PDZ domain containing ring finger 4 Neighboring gene YY1 associated factor 2 Neighboring gene zinc finger CCHC-type and RNA binding motif containing 1

    Genomic regions, transcripts, and products

    Pathways from BioSystems

    • Other types of O-glycan biosynthesis, organism-specific biosystem (from KEGG)
      Other types of O-glycan biosynthesis, organism-specific biosystemO-linked glycosylation is the attachment of monosaccharides to the hydroxyl groups of amino acids, mostly serine and threonine, and is found in eukaryotes, archaea and bacteria. O-glycans exhibit div...
    • Other types of O-glycan biosynthesis, conserved biosystem (from KEGG)
      Other types of O-glycan biosynthesis, conserved biosystemO-linked glycosylation is the attachment of monosaccharides to the hydroxyl groups of amino acids, mostly serine and threonine, and is found in eukaryotes, archaea and bacteria. O-glycans exhibit div...

    General gene information

    Homology

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    UDP-xylosyltransferase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Process Evidence Code Pubs
    O-glycan processing ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Component Evidence Code Pubs
    integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    glucoside xylosyltransferase 1
    Names
    glycosyltransferase 8 domain containing 3
    glycosyltransferase 8 domain-containing protein 3
    NP_001025907.1
    XP_015136681.1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001030736.1NP_001025907.1  glucoside xylosyltransferase 1

      See identical proteins and their annotated locations for NP_001025907.1

      Status: PROVISIONAL

      Source sequence(s)
      AJ720098
      UniProtKB/Swiss-Prot
      Q5ZKI6
      Related
      ENSGALP00000015499.2, ENSGALT00000015515.3
      Conserved Domains (2) summary
      cd06430
      Location:109410
      GT8_like_2; GT8_like_2 represents a subfamily of GT8 with unknown function
      COG1442
      Location:140390
      RfaJ; Lipopolysaccharide biosynthesis protein, LPS:glycosyltransferase [Cell wall/membrane/envelope biogenesis]

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCg6a Primary Assembly

    Genomic

    1. NC_006088.5 Reference GRCg6a Primary Assembly

      Range
      29589322..29620400 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015281195.1XP_015136681.1  glucoside xylosyltransferase 1 isoform X1

      Conserved Domains (2) summary
      cd06430
      Location:78379
      GT8_like_2; GT8_like_2 represents a subfamily of GT8 with unknown function
      COG1442
      Location:109307
      RfaJ; Lipopolysaccharide biosynthesis protein, LPS:glycosyltransferase [Cell wall/membrane/envelope biogenesis]
    Support Center