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    hprt1 hypoxanthine phosphoribosyltransferase 1 [ Danio rerio (zebrafish) ]

    Gene ID: 406259, updated on 26-Aug-2018

    Summary

    Official Symbol
    hprt1provided by ZNC
    Official Full Name
    hypoxanthine phosphoribosyltransferase 1provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-040426-1918
    See related
    Ensembl:ENSDARG00000008884 Vega:OTTDARG00000021162
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio
    Also known as
    zgc:56221; zgc:86608; id:ibd1344; id:ibd5108; wu:fc10g09

    Genomic context

    See hprt1 in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 14 NC_007125.7 (31509900..31520855)
    105 previous assembly GRCz10 (GCF_000002035.5) 14 NC_007125.6 (31169589..31180541)

    Chromosome 14 - NC_007125.7Genomic Context describing neighboring genes Neighboring gene calcium binding protein 39, like 1 Neighboring gene PHD finger protein 6 Neighboring gene microRNA 457b Neighboring gene family with sequence similarity 122B

    Genomic regions, transcripts, and products

    Pathways from BioSystems

    General gene information

    Markers

    Homology

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    guanine phosphoribosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
     
    hypoxanthine phosphoribosyltransferase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    hypoxanthine phosphoribosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
     
    magnesium ion binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    nucleotide binding IEA
    Inferred from Electronic Annotation
    more info
     
    transferase activity IEA
    Inferred from Electronic Annotation
    more info
     
    transferase activity, transferring glycosyl groups IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    GMP salvage IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    IMP salvage IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    IMP salvage IEA
    Inferred from Electronic Annotation
    more info
     
    adenine salvage IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    guanine salvage IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    hypoxanthine metabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    nucleoside metabolic process IEA
    Inferred from Electronic Annotation
    more info
     
    purine ribonucleoside salvage IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    purine ribonucleoside salvage IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    hypoxanthine-guanine phosphoribosyltransferase
    NP_998151.1
    XP_005173261.1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_212986.2NP_998151.1  hypoxanthine-guanine phosphoribosyltransferase

      See identical proteins and their annotated locations for NP_998151.1

      Status: VALIDATED

      Source sequence(s)
      BX511227, EH497665
      UniProtKB/TrEMBL
      Q7ZV49
      Related
      ENSDARP00000123706.1, OTTDARP00000038242, ENSDART00000024075.10
      Conserved Domains (1) summary
      cl00309
      Location:6218
      PRTases_typeI; Phosphoribosyl transferase (PRT)-type I domain

    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007125.7 Reference GRCz11 Primary Assembly

      Range
      31509900..31520855
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005173204.4XP_005173261.1  hypoxanthine-guanine phosphoribosyltransferase isoform X1

      UniProtKB/TrEMBL
      Q7ZV49
      Related
      ENSDARP00000111738.2, OTTDARP00000021959, ENSDART00000124499.4
      Conserved Domains (1) summary
      cl00309
      Location:6218
      PRTases_typeI; Phosphoribosyl transferase (PRT)-type I domain

    Reference GRCz11 ALT_DRER_TU_1

    Genomic

    1. NW_018394915.1 Reference GRCz11 ALT_DRER_TU_1

      Range
      66045..75878
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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