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    LOC394444 egg envelope component ZPC [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 394444, updated on 20-Jun-2018

    Summary

    Symbol
    LOC394444provided by Xenbase
    Full Name
    egg envelope component ZPCprovided by Xenbase
    Primary source
    Xenbase:XB-GENE-5888886
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Also known as
    gp41; gp43

    Genomic context

    See LOC394444 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    103 current Xenopus_tropicalis_v9.1 (GCF_000004195.3) 3 NC_030679.1 (133994559..133999512, complement)
    102 previous assembly Xtropicalis_v7 (GCF_000004195.2) Unplaced Scaffold NW_004668266.1 (130918..135871, complement)

    Chromosome 3 - NC_030679.1Genomic Context describing neighboring genes Neighboring gene olfactory receptor 5V1-like Neighboring gene olfactory receptor 11A1-like Neighboring gene glutathione S-transferase P 1-like Neighboring gene glutathione S-transferase pi 1

    Genomic regions, transcripts, and products

    Pathways from BioSystems

    General gene information

    Homology

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_203522.1NP_988853.1  egg envelope component ZPC precursor

      See identical proteins and their annotated locations for NP_988853.1

      Status: PROVISIONAL

      Source sequence(s)
      AY079193
      UniProtKB/TrEMBL
      Q8AWX3
      Conserved Domains (2) summary
      smart00241
      Location:75333
      ZP; Zona pellucida (ZP) domain
      pfam00100
      Location:206331
      Zona_pellucida; Zona pellucida-like domain

    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_tropicalis_v9.1 Primary Assembly

    Genomic

    1. NC_030679.1 Reference Xenopus_tropicalis_v9.1 Primary Assembly

      Range
      133994559..133999512 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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