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    gna13a guanine nucleotide binding protein (G protein), alpha 13a [ Danio rerio (zebrafish) ]

    Gene ID: 326825, updated on 18-Sep-2018

    Summary

    Official Symbol
    gna13aprovided by ZNC
    Official Full Name
    guanine nucleotide binding protein (G protein), alpha 13aprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-030131-5024
    See related
    Ensembl:ENSDARG00000073765 Vega:OTTDARG00000040584
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio
    Also known as
    gna13; wu:fe25e05; zgc:112436

    Genomic context

    See gna13a in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 12 NC_007123.7 (20552152..20565371)
    105 previous assembly GRCz10 (GCF_000002035.5) Unplaced Scaffold NW_008805402.1 (37645..37935)
    105 previous assembly GRCz10 (GCF_000002035.5) Unplaced Scaffold NW_008805585.1 (3550..4632)

    Chromosome 12 - NC_007123.7Genomic Context describing neighboring genes Neighboring gene leucine carboxyl methyltransferase 1 Neighboring gene Rho GTPase activating protein 17a Neighboring gene archaemetzincin-2-like Neighboring gene monocarboxylate transporter 7-like Neighboring gene arylsulfatase G

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Pathways from BioSystems

    General gene information

    Markers

    Homology

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    D5 dopamine receptor binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    G protein-coupled receptor binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    G protein-coupled receptor binding IEA
    Inferred from Electronic Annotation
    more info
     
    G-protein beta/gamma-subunit complex binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    G-protein beta/gamma-subunit complex binding IEA
    Inferred from Electronic Annotation
    more info
     
    GTP binding IEA
    Inferred from Electronic Annotation
    more info
     
    GTPase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    GTPase activity IEA
    Inferred from Electronic Annotation
    more info
     
    cadherin binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    guanyl nucleotide binding IEA
    Inferred from Electronic Annotation
    more info
     
    nucleotide binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    G protein-coupled receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
     
    Rho protein signal transduction IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Rho protein signal transduction IEA
    Inferred from Electronic Annotation
    more info
     
    Rho protein signal transduction IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    adenylate cyclase-modulating G protein-coupled receptor signaling pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    cell migration involved in gastrulation IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    cell migration involved in heart development IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    convergent extension IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    endocardial progenitor cell migration to the midline involved in heart field formation IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    endoderm development IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    epiboly involved in gastrulation with mouth forming second IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    gastrulation with mouth forming second IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    gastrulation with mouth forming second IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    myelination of posterior lateral line nerve axons IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    negative regulation of cell-cell adhesion mediated by cadherin IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    oligodendrocyte development IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    regulation of actin cytoskeleton organization IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    regulation of actin cytoskeleton organization IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    signal transduction IEA
    Inferred from Electronic Annotation
    more info
     
    stress fiber assembly IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    unidimensional cell growth IGI
    Inferred from Genetic Interaction
    more info
    PubMed 
    Component Evidence Code Pubs
    brush border membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    heterotrimeric G-protein complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 

    General protein information

    Preferred Names
    guanine nucleotide-binding protein subunit alpha-13
    Names
    Galpha 13a

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001012243.3NP_001012243.3  guanine nucleotide-binding protein subunit alpha-13

      Status: VALIDATED

      Source sequence(s)
      EH546568, EH567709, FP885542
      Conserved Domains (1) summary
      smart00275
      Location:27374
      G_alpha; G protein alpha subunit

    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007123.7 Reference GRCz11 Primary Assembly

      Range
      20552152..20565371
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_021480028.1XP_021335703.1  guanine nucleotide-binding protein subunit alpha-13 isoform X1

      Related
      ENSDARP00000102226.3, ENSDART00000113224.4
      Conserved Domains (1) summary
      smart00275
      Location:27374
      G_alpha; G protein alpha subunit
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