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    cd82b CD82 molecule b [ Danio rerio (zebrafish) ]

    Gene ID: 324137, updated on 1-Aug-2018

    Summary

    Official Symbol
    cd82bprovided by ZNC
    Official Full Name
    CD82 molecule bprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-030131-2857
    See related
    Ensembl:ENSDARG00000026070 Vega:OTTDARG00000013269
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio
    Also known as
    cd82; kai1; wu:fc19g11

    Genomic context

    See cd82b in Genome Data Viewer
    Location:
    chromosome: 18
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 18 NC_007129.7 (27571466..27626391)
    105 previous assembly GRCz10 (GCF_000002035.5) 18 NC_007129.6 (27593226..27648151)

    Chromosome 18 - NC_007129.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110438096 Neighboring gene tumor protein p53 inducible protein 11b Neighboring gene tetraspanin 18b Neighboring gene IQ motif containing G

    Genomic regions, transcripts, and products

    Pathways from BioSystems

    • p53 signaling pathway, organism-specific biosystem (from KEGG)
      p53 signaling pathway, organism-specific biosystemp53 activation is induced by a number of stress signals, including DNA damage, oxidative stress and activated oncogenes. The p53 protein is employed as a transcriptional activator of p53-regulated ge...
    • p53 signaling pathway, conserved biosystem (from KEGG)
      p53 signaling pathway, conserved biosystemp53 activation is induced by a number of stress signals, including DNA damage, oxidative stress and activated oncogenes. The p53 protein is employed as a transcriptional activator of p53-regulated ge...

    General gene information

    Markers

    Homology

    Gene Ontology Provided by ZFIN

    Process Evidence Code Pubs
    cell surface receptor signaling pathway IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Component Evidence Code Pubs
    integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    integral component of plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    CD82 molecule b
    Names
    CD82 antigen, b
    kangai 1 (suppression of tumorigenicity 6, prostate)

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_212663.1NP_997828.1  CD82 molecule b

      See identical proteins and their annotated locations for NP_997828.1

      Status: PROVISIONAL

      Source sequence(s)
      BC054586
      UniProtKB/TrEMBL
      Q7T2E0
      Related
      ENSDARP00000116394.1, OTTDARP00000013374, ENSDART00000147886.2, OTTDART00000015750
      Conserved Domains (2) summary
      cd03160
      Location:106218
      CD37_CD82_like_LEL; Tetraspanin, extracellular domain or large extracellular loop (LEL), CD37_CD82_Like family. Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment ...
      pfam00335
      Location:24245
      Tetraspannin; Tetraspanin family

    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007129.7 Reference GRCz11 Primary Assembly

      Range
      27571466..27626391
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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