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    pola2 polymerase (DNA directed), alpha 2 [ Danio rerio (zebrafish) ]

    Gene ID: 322059, updated on 1-Aug-2018

    Summary

    Official Symbol
    pola2provided by ZNC
    Official Full Name
    polymerase (DNA directed), alpha 2provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-030131-778
    See related
    Ensembl:ENSDARG00000015070 Vega:OTTDARG00000020167
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio
    Also known as
    zgc:56124; zgc:77841; wu:fb48f05
    Orthologs

    Genomic context

    See pola2 in Genome Data Viewer
    Location:
    chromosome: 8
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 8 NC_007119.7 (17174795..17184516, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 8 NC_007119.6 (17139083..17148804, complement)

    Chromosome 8 - NC_007119.7Genomic Context describing neighboring genes Neighboring gene mitochondrial ribosomal protein S36 Neighboring gene centromere protein H Neighboring gene DIM1 dimethyladenosine transferase 1-like (S. cerevisiae) Neighboring gene v-ski avian sarcoma viral oncogene homolog a

    Genomic regions, transcripts, and products

    Pathways from BioSystems

    General gene information

    Markers

    Homology

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    DNA binding IEA
    Inferred from Electronic Annotation
    more info
     
    DNA-directed DNA polymerase activity IEA
    Inferred from Electronic Annotation
    more info
     
    protein heterodimerization activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Process Evidence Code Pubs
    DNA replication IEA
    Inferred from Electronic Annotation
    more info
     
    DNA replication initiation IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Component Evidence Code Pubs
    alpha DNA polymerase:primase complex IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    nucleus IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    DNA polymerase alpha subunit B
    Names
    polymerase (DNA-directed), alpha (70kD)

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_199581.2NP_955875.2  DNA polymerase alpha subunit B

      Status: VALIDATED

      Source sequence(s)
      BC065460, BX465215, EH494906, EH521232, EH582754, EH606241
      UniProtKB/TrEMBL
      B0S687, Q6P0S9
      Related
      ENSDARP00000002618.6, OTTDARP00000020667, ENSDART00000025803.7, OTTDART00000025102
      Conserved Domains (2) summary
      pfam04042
      Location:346550
      DNA_pol_E_B; DNA polymerase alpha/epsilon subunit B
      pfam08418
      Location:23246
      Pol_alpha_B_N; DNA polymerase alpha subunit B N-terminal

    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007119.7 Reference GRCz11 Primary Assembly

      Range
      17174795..17184516 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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