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    rex2 putative RNA exonuclease [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2539853, updated on 5-Aug-2018

    Summary

    Gene symbol
    rex2
    Gene description
    putative RNA exonuclease
    Locus tag
    SPBC1347.07
    Gene type
    protein coding
    RNA name
    putative RNA exonuclease
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces

    Genomic context

    See rex2 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    5
    Sequence:
    Chromosome: II; NC_003423.3 (4073448..4075761)

    Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene miscRNA Neighboring gene serine/threonine protein kinase Cki1 Neighboring gene putative ribonuclease H2 complex subunit Neighboring gene putative hexaprenyldihydroxybenzoate methyltransferase Neighboring gene miscRNA Neighboring gene MCM-associated protein Mcm10

    Pathways from BioSystems

    • Ribosome biogenesis in eukaryotes, organism-specific biosystem (from KEGG)
      Ribosome biogenesis in eukaryotes, organism-specific biosystemRibosomes are the cellular factories responsible for making proteins. In eukaryotes, ribosome biogenesis involves the production and correct assembly of four rRNAs and about 80 ribosomal proteins. It...
    • Ribosome biogenesis in eukaryotes, conserved biosystem (from KEGG)
      Ribosome biogenesis in eukaryotes, conserved biosystemRibosomes are the cellular factories responsible for making proteins. In eukaryotes, ribosome biogenesis involves the production and correct assembly of four rRNAs and about 80 ribosomal proteins. It...

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    3'-5'-exoribonuclease activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    3'-5'-exoribonuclease activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    rRNA processing ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    Component Evidence Code Pubs
    cytosol HDA PubMed 
    mitochondrion IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    mitochondrion ISS
    Inferred from Sequence or Structural Similarity
    more info
     
    nucleus HDA PubMed 

    General protein information

    Preferred Names
    putative RNA exonuclease
    NP_596699.2

    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003423.3 Reference assembly

      Range
      4073448..4075761
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001022623.2NP_596699.2  putative RNA exonuclease [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_596699.2

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      O94626
      Conserved Domains (1) summary
      COG1949
      Location:73252
      Orn; Oligoribonuclease (3'-5' exoribonuclease) [RNA processing and modification]
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