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    trpp-11 TRansport Protein Particle [ Caenorhabditis elegans ]

    Gene ID: 175236, updated on 6-Jun-2018

    Summary

    Gene symbol
    trpp-11
    Gene description
    TRansport Protein Particle
    Primary source
    WormBase:WBGene00015173
    Locus tag
    CELE_B0412.3
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis

    Genomic context

    See trpp-11 in Genome Data Viewer
    Location:
    chromosome: III
    Exon count:
    17
    Sequence:
    Chromosome: III; NC_003281.10 (795139..809360)

    Chromosome III - NC_003281.10Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Ribosomal Protein, Small subunit Neighboring gene ncRNA Neighboring gene Dauer larva development regulatory growth factor daf-7 Neighboring gene DAChsund transcription factor homolog Neighboring gene ncRNA

    Pathways from BioSystems

    General gene information

    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 

    General protein information

    Preferred Names
    TRansport Protein Particle
    NP_001309583.1
    • Product from WormBase gene class trpp;
      Confirmed by transcript evidence
    NP_001309584.1
    • Product from WormBase gene class trpp;
      Confirmed by transcript evidence
    NP_001309585.1
    • Product from WormBase gene class trpp;
      Confirmed by transcript evidence
    NP_001309586.1
    • Product from WormBase gene class trpp;
      Confirmed by transcript evidence
    NP_497264.2
    • Product from WormBase gene class trpp;
      Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003281.10 Reference assembly

      Range
      795139..809360
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001322633.1NP_001309583.1  TRansport Protein Particle [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A131MD37
      Conserved Domains (2) summary
      pfam11817
      Location:260513
      Foie-gras_1; Foie gras liver health family 1
      pfam12584
      Location:9691058
      TRAPPC10; Trafficking protein particle complex subunit 10, TRAPPC10
    2. NM_064863.5NP_497264.2  TRansport Protein Particle [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A131MBH5
      Conserved Domains (2) summary
      pfam11817
      Location:1242
      Foie-gras_1; Foie gras liver health family 1
      pfam12584
      Location:698787
      TRAPPC10; Trafficking protein particle complex subunit 10, TRAPPC10
    3. NM_001322637.1NP_001309584.1  TRansport Protein Particle [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A131MBP2
      Conserved Domains (1) summary
      pfam12584
      Location:162251
      TRAPPC10; Trafficking protein particle complex subunit 10, TRAPPC10
    4. NM_001322640.1NP_001309585.1  TRansport Protein Particle [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A131MCR0
      Conserved Domains (1) summary
      pfam12584
      Location:341
      TRAPPC10; Trafficking protein particle complex subunit 10, TRAPPC10
    5. NM_001322646.1NP_001309586.1  TRansport Protein Particle [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A131MCW2
      Conserved Domains (1) summary
      pfam12584
      Location:532
      TRAPPC10; Trafficking protein particle complex subunit 10, TRAPPC10
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