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    Fgfbp1 fibroblast growth factor binding protein 1 [ Mus musculus (house mouse) ]

    Gene ID: 14181, updated on 12-Aug-2018

    Summary

    Official Symbol
    Fgfbp1provided by MGI
    Official Full Name
    fibroblast growth factor binding protein 1provided by MGI
    Primary source
    MGI:MGI:1096350
    See related
    Ensembl:ENSMUSG00000048373 Vega:OTTMUSG00000029016
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    FGF-BP; FGF-BP1; FGFBP-1
    Expression
    Biased expression in large intestine adult (RPKM 24.0), stomach adult (RPKM 14.7) and 11 other tissues See more
    Orthologs

    Genomic context

    See Fgfbp1 in Genome Data Viewer
    Location:
    5; 5 B3
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 5 NC_000071.6 (43978858..43981829, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 5 NC_000071.5 (44370099..44373001, complement)

    Chromosome 5 - NC_000071.6Genomic Context describing neighboring genes Neighboring gene apurinic/apyrimidinic endonuclease 2 pseudogene Neighboring gene ribosomal protein L15 pseudogene Neighboring gene prominin 1 Neighboring gene predicted gene, 35900

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (1)  1 citation
    • Endonuclease-mediated (1) 

    Pathways from BioSystems

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    fibroblast growth factor binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    growth factor binding IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    cell surface IDA
    Inferred from Direct Assay
    more info
    PubMed 
    extracellular region IDA
    Inferred from Direct Assay
    more info
    PubMed 
    membrane IEA
    Inferred from Electronic Annotation
    more info
     
    plasma membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    fibroblast growth factor-binding protein 1
    Names
    FGF-binding protein 1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001271616.1NP_001258545.1  fibroblast growth factor-binding protein 1 precursor

      See identical proteins and their annotated locations for NP_001258545.1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) represents the longer transcript. Both variants 1 and 2 encode the same protein.
      Source sequence(s)
      AC164004, BC065774, CB524251, DV059653
      Consensus CDS
      CCDS19268.1
      UniProtKB/Swiss-Prot
      O70514
      Related
      ENSMUSP00000142520.1, OTTMUSP00000071067, ENSMUST00000199894.1, OTTMUST00000133821
      Conserved Domains (1) summary
      pfam06473
      Location:15247
      FGF-BP1; FGF binding protein 1 (FGF-BP1)
    2. NM_008009.4NP_032035.2  fibroblast growth factor-binding protein 1 precursor

      See identical proteins and their annotated locations for NP_032035.2

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Both variants 1 and 2 encode the same protein.
      Source sequence(s)
      AC164004, BC065774, CB524251
      Consensus CDS
      CCDS19268.1
      UniProtKB/Swiss-Prot
      O70514
      Related
      ENSMUSP00000056900.7, OTTMUSP00000071068, ENSMUST00000061299.8, OTTMUST00000133822
      Conserved Domains (1) summary
      pfam06473
      Location:15247
      FGF-BP1; FGF binding protein 1 (FGF-BP1)

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000071.6 Reference GRCm38.p4 C57BL/6J

      Range
      43978858..43981829 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006503711.3XP_006503774.1  fibroblast growth factor-binding protein 1 isoform X1

      See identical proteins and their annotated locations for XP_006503774.1

      UniProtKB/Swiss-Prot
      O70514
      Conserved Domains (1) summary
      pfam06473
      Location:15247
      FGF-BP1; FGF binding protein 1 (FGF-BP1)
    2. XM_006503712.3XP_006503775.1  fibroblast growth factor-binding protein 1 isoform X1

      See identical proteins and their annotated locations for XP_006503775.1

      UniProtKB/Swiss-Prot
      O70514
      Related
      ENSMUSP00000143011.1, OTTMUSP00000071066, ENSMUST00000199481.1, OTTMUST00000133820
      Conserved Domains (1) summary
      pfam06473
      Location:15247
      FGF-BP1; FGF binding protein 1 (FGF-BP1)
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