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    abcg5 ATP binding cassette subfamily G member 5 [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 100145776, updated on 20-Jun-2018

    Summary

    Symbol
    abcg5provided by Xenbase
    Full Name
    ATP binding cassette subfamily G member 5provided by Xenbase
    Primary source
    Xenbase:XB-GENE-963936
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Orthologs

    Genomic context

    See abcg5 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    103 current Xenopus_tropicalis_v9.1 (GCF_000004195.3) 5 NC_030681.1 (14552809..14570778, complement)
    102 previous assembly Xtropicalis_v7 (GCF_000004195.2) Unplaced Scaffold NW_004668237.1 (109390717..109408379)

    Chromosome 5 - NC_030681.1Genomic Context describing neighboring genes Neighboring gene pleckstrin homology, MyTH4 and FERM domain containing H2 Neighboring gene dynein, cytoplasmic 2, light intermediate chain 1 Neighboring gene ATP binding cassette subfamily G member 8 Neighboring gene leucine rich pentatricopeptide repeat containing Neighboring gene protein phosphatase, Mg2+/Mn2+ dependent 1B

    Genomic regions, transcripts, and products

    Pathways from BioSystems

    General gene information

    Homology

    General protein information

    Preferred Names
    ATP-binding cassette sub-family G member 5
    Names
    ATP-binding cassette, sub-family G (WHITE), member 5

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001127141.1NP_001120613.1  ATP-binding cassette sub-family G member 5

      See identical proteins and their annotated locations for NP_001120613.1

      Status: PROVISIONAL

      Source sequence(s)
      BC161751
      UniProtKB/TrEMBL
      B1WBG9
      Conserved Domains (3) summary
      cd03234
      Location:51277
      ABCG_White; White pigment protein homolog of ABCG transporter subfamily
      TIGR00955
      Location:54653
      3a01204; The Eye Pigment Precursor Transporter (EPP) Family protein
      pfam01061
      Location:373580
      ABC2_membrane; ABC-2 type transporter

    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_tropicalis_v9.1 Primary Assembly

    Genomic

    1. NC_030681.1 Reference Xenopus_tropicalis_v9.1 Primary Assembly

      Range
      14552809..14570778 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_018093796.1XP_017949285.1  ATP-binding cassette sub-family G member 5 isoform X1

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