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    DJ1B Class I glutamine amidotransferase-like superfamily protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 841762, updated on 22-May-2018
    Gene symbol
    DJ1B
    Gene description
    Class I glutamine amidotransferase-like superfamily protein
    Primary source
    Araport:AT1G53280
    Locus tag
    AT1G53280
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AtDJ1B; DJ-1 homolog B; DJ-1b; F12M16.18; F12M16_18
    Summary
    Encodes a homolog of animal DJ-1 superfamily protein. In the A. thaliana genome, three genes encoding close homologs of human DJ-1 were identified AT3G14990 (DJ1A), AT1G53280 (DJ1B) and AT4G34020 (DJ1C). Among the three homologs, DJ1C is essential for chloroplast development and viability. It exhibits glyoxalase activity towards glyoxal and methylglyoxal.
    See DJ1B in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    7
    Sequence:
    Chromosome: 1; NC_003070.9 (19864726..19867389, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene ABC-2 type transporter family protein Neighboring gene Plant thionin family protein Neighboring gene plant thionin family protein

    Homology

    NM_104206.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    glyoxalase III activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    protein deglycase activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    transferase activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    glutamine metabolic process IEA
    Inferred from Electronic Annotation
    more info
     
    guanine deglycation, glyoxal removal IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    lactate biosynthetic process IDA
    Inferred from Direct Assay
    more info
    PubMed 
    methylglyoxal catabolic process to lactate IDA
    Inferred from Direct Assay
    more info
    PubMed 
    protein deglycation, glyoxal removal IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Component Evidence Code Pubs
    chloroplast IDA
    Inferred from Direct Assay
    more info
    PubMed 
    chloroplast ISM
    Inferred from Sequence Model
    more info
     
    chloroplast stroma IDA
    Inferred from Direct Assay
    more info
    PubMed 
    cytosol IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Preferred Names
    Class I glutamine amidotransferase-like superfamily protein
    NP_564626.1
    • Class I glutamine amidotransferase-like superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DJ-1 (InterPro:IPR006287), ThiJ/PfpI (InterPro:IPR002818); BEST Arabidopsis thaliana protein match is: Class I glutamine amidotransferase-like superfamily protein (TAIR:AT3G14990.1); Has 10790 Blast hits to 6453 proteins in 1943 species: Archae - 322; Bacteria - 9097; Metazoa - 532; Fungi - 91; Plants - 351; Viruses - 0; Other Eukaryotes - 397 (source: NCBI BLink).

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      19864726..19867389 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001333585.1NP_001322694.1  Class I glutamine amidotransferase-like superfamily protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AUR1
    2. NM_104206.3NP_564626.1  Class I glutamine amidotransferase-like superfamily protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_564626.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9MAH3
      Conserved Domains (2) summary
      cd03135
      Location:260423
      GATase1_DJ-1; Type 1 glutamine amidotransferase (GATase1)-like domain found in Human DJ-1
      TIGR01383
      Location:54231
      not_thiJ; DJ-1 family protein
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