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    si:dkey-84o3.7 si:dkey-84o3.7 [ Danio rerio (zebrafish) ]

    Gene ID: 799634, updated on 9-Apr-2018
    Official Symbol
    si:dkey-84o3.7provided by ZNC
    Official Full Name
    si:dkey-84o3.7provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-091113-30
    See related
    Ensembl:ENSDARG00000095687 Vega:OTTDARG00000031175
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio
    See si:dkey-84o3.7 in Genome Data Viewer Map Viewer
    Location:
    chromosome: 21
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 21 NC_007132.7 (4410703..4424566)
    105 previous assembly GRCz10 (GCF_000002035.5) 21 NC_007132.6 (4256434..4260355)

    Chromosome 21 - NC_007132.7Genomic Context describing neighboring genes Neighboring gene serine protease HTRA2, mitochondrial-like Neighboring gene serine/threonine-protein kinase pim-1-like Neighboring gene serine protease HTRA2, mitochondrial-like Neighboring gene Pim proto-oncogene, serine/threonine kinase, related 161 Neighboring gene serine/threonine-protein kinase pim-3-like

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Homology

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    serine-type endopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    proteolysis IEA
    Inferred from Electronic Annotation
    more info
     
    Preferred Names
    serine protease HTRA2, mitochondrial-like

    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007132.7 Reference GRCz11 Primary Assembly

      Range
      4410703..4424566
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_017352947.2XP_017208436.1  serine protease HTRA2, mitochondrial-like

      UniProtKB/TrEMBL
      E9QHZ3
      Related
      ENSDARP00000113954.1, OTTDARP00000034367, ENSDART00000136831.3
      Conserved Domains (2) summary
      cd00987
      Location:102186
      PDZ_serine_protease; PDZ domain of trypsin-like serine proteases, such as DegP/HtrA, which are oligomeric proteins involved in heat-shock response, chaperone function, and apoptosis. May be responsible for substrate recognition and/or binding, as most PDZ domains bind ...
      pfam13365
      Location:159
      Trypsin_2; Trypsin-like peptidase domain
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