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    epha5 EPH receptor A5 [ Danio rerio (zebrafish) ]

    Gene ID: 797595, updated on 1-Aug-2018

    Summary

    Gene symbol
    epha5
    Gene description
    EPH receptor A5
    See related
    Ensembl:ENSDARG00000058284
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio
    Orthologs

    Genomic context

    See epha5 in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 10 NC_007121.7 (12517078..12731213)
    105 previous assembly GRCz10 (GCF_000002035.5) 10 NC_007121.6 (12559036..12773009)

    Chromosome 10 - NC_007121.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110440065 Neighboring gene uncharacterized LOC793244 Neighboring gene uncharacterized LOC555422 Neighboring gene uncharacterized LOC101882817 Neighboring gene lysophosphatidic acid receptor 1

    Genomic regions, transcripts, and products

    General gene information

    Homology

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007121.7 Reference GRCz11 Primary Assembly

      Range
      12517078..12731213
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001338028.8XP_001338064.4  ephrin type-A receptor 5 isoform X1

      Related
      ENSDARP00000075583.5, ENSDART00000081140.5
      Conserved Domains (7) summary
      smart00454
      Location:908973
      SAM; Sterile alpha motif
      cd10483
      Location:28200
      EphR_LBD_A5; Ligand Binding Domain of Ephrin type-A Receptor 5
      cd00063
      Location:437527
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      cd05066
      Location:616882
      PTKc_EphR_A; Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors
      pfam07714
      Location:621878
      Pkinase_Tyr; Protein tyrosine kinase
      pfam14575
      Location:546616
      EphA2_TM; Ephrin type-A receptor 2 transmembrane domain
      cl15755
      Location:913976
      SAM_superfamily; SAM (Sterile alpha motif )
    2. XM_021479281.1XP_021334956.1  ephrin type-A receptor 5 isoform X2

      Conserved Domains (6) summary
      cd10483
      Location:28200
      EphR_LBD_A5; Ligand Binding Domain of Ephrin type-A Receptor 5
      cd00063
      Location:437527
      FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
      cd05066
      Location:615881
      PTKc_EphR_A; Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors
      pfam00041
      Location:327422
      fn3; Fibronectin type III domain
      pfam14575
      Location:545615
      EphA2_TM; Ephrin type-A receptor 2 transmembrane domain
      cl15755
      Location:912975
      SAM_superfamily; SAM (Sterile alpha motif )
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