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    tbxas1 thromboxane A synthase 1 (platelet) [ Danio rerio (zebrafish) ]

    Gene ID: 792041, updated on 1-Aug-2018

    Summary

    Official Symbol
    tbxas1provided by ZNC
    Official Full Name
    thromboxane A synthase 1 (platelet)provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-030131-8805
    See related
    Ensembl:ENSDARG00000002249 Vega:OTTDARG00000012520
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio
    Also known as
    wu:fk19d08; zgc:136708
    Orthologs

    Genomic context

    See tbxas1 in Genome Data Viewer
    Location:
    chromosome: 18
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 18 NC_007129.7 (12655746..12834328)
    105 previous assembly GRCz10 (GCF_000002035.5) 18 NC_007129.6 (12687028..12865610)

    Chromosome 18 - NC_007129.7Genomic Context describing neighboring genes Neighboring gene si:ch211-1e14.1 Neighboring gene homeodomain interacting protein kinase 2 Neighboring gene si:dkey-16j24.1 Neighboring gene uncharacterized LOC110438085 Neighboring gene poly (ADP-ribose) polymerase family, member 12a Neighboring gene SLIT-ROBO Rho GTPase activating protein 1a

    Genomic regions, transcripts, and products

    Pathways from BioSystems

    General gene information

    Markers

    Homology

    Clone Names

    • MGC136708

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    heme binding IEA
    Inferred from Electronic Annotation
    more info
     
    iron ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    monooxygenase activity IEA
    Inferred from Electronic Annotation
    more info
     
    oxidoreductase activity IEA
    Inferred from Electronic Annotation
    more info
     
    oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    oxidation-reduction process IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    thromboxane-A synthase
    Names
    thromboxane A synthase 1 (platelet, cytochrome P450, family 5, subfamily A)
    NP_991172.2

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_205609.2NP_991172.2  thromboxane-A synthase

      Status: VALIDATED

      Source sequence(s)
      BC115233, BX247877, BX927072, DR716726, EH463476, EH494479
      UniProtKB/TrEMBL
      Q1LUX9, Q6TGT4
      Related
      ENSDARP00000121308.1, OTTDARP00000012571, ENSDART00000144246.2, OTTDART00000014762
      Conserved Domains (1) summary
      pfam00067
      Location:51536
      p450; Cytochrome P450

    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007129.7 Reference GRCz11 Primary Assembly

      Range
      12655746..12834328
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCz11 ALT_DRER_TU_2

    Genomic

    1. NW_018395335.1 Reference GRCz11 ALT_DRER_TU_2

      Range
      387928..467083
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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