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    Pou5f2 POU domain class 5, transcription factor 2 [ Mus musculus (house mouse) ]

    Gene ID: 75507, updated on 3-Jun-2018
    Official Symbol
    Pou5f2provided by MGI
    Official Full Name
    POU domain class 5, transcription factor 2provided by MGI
    Primary source
    MGI:MGI:1922757
    See related
    Ensembl:ENSMUSG00000093668 Vega:OTTMUSG00000039919
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Sprm1; SPRM-1; 1700013G10Rik
    Orthologs
    See Pou5f2 in Genome Data Viewer
    Location:
    13; 13 C1
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 13 NC_000079.6 (78024902..78026296)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 13 NC_000079.5 (78164163..78165557)

    Chromosome 13 - NC_000079.6Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 2210408I21 gene Neighboring gene NSA2 ribosome biogenesis homolog pseudogene Neighboring gene ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1, pseudogene Neighboring gene family with sequence similarity 172, member A Neighboring gene ATPase, H+ transporting, lysosomal V1 subunit A pseudogene Neighboring gene predicted gene, 38604

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    DNA binding IEA
    Inferred from Electronic Annotation
    more info
     
    DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
     
    sequence-specific DNA binding IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Process Evidence Code Pubs
    regulation of transcription, DNA-templated IEA
    Inferred from Electronic Annotation
    more info
     
    transcription, DNA-templated IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    cellular_component ND
    No biological Data available
    more info
     
    nucleus IEA
    Inferred from Electronic Annotation
    more info
     
    Preferred Names
    POU domain, class 5, transcription factor 2
    Names
    sperm 1 POU domain transcription factor
    sperm-associated POU domain protein 1

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_029315.1NP_083591.1  POU domain, class 5, transcription factor 2

      See identical proteins and their annotated locations for NP_083591.1

      Status: VALIDATED

      Source sequence(s)
      AK005948, AK076753
      Consensus CDS
      CCDS56895.1
      UniProtKB/Swiss-Prot
      Q9DAC9
      UniProtKB/TrEMBL
      A0A0R4J273
      Related
      ENSMUSP00000135597.1, OTTMUSP00000057985, ENSMUST00000175955.3, OTTMUST00000103739
      Conserved Domains (2) summary
      pfam00046
      Location:214250
      Homeobox; Homeobox domain
      pfam00157
      Location:113181
      Pou; Pou domain - N-terminal to homeobox domain

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000079.6 Reference GRCm38.p4 C57BL/6J

      Range
      78024902..78026296
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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