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    Hepacam hepatocyte cell adhesion molecule [ Mus musculus (house mouse) ]

    Gene ID: 72927, updated on 8-Apr-2018
    Official Symbol
    Hepacamprovided by MGI
    Official Full Name
    hepatocyte cell adhesion moleculeprovided by MGI
    Primary source
    MGI:MGI:1920177
    See related
    Ensembl:ENSMUSG00000046240 Vega:OTTMUSG00000016793
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Hepn1; Glialcam; 2900042E01Rik
    Expression
    Biased expression in cerebellum adult (RPKM 30.4), cortex adult (RPKM 23.5) and 5 other tissues See more
    Orthologs
    Location:
    9; 9 A4
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 9 NC_000075.6 (37367606..37386572)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 9 NC_000075.5 (37175191..37194157)

    Chromosome 9 - NC_000075.6Genomic Context describing neighboring genes Neighboring gene solute carrier family 37 (glycerol-3-phosphate transporter), member 2 Neighboring gene SEC61, gamma subunit pseudogene Neighboring gene coiled-coil domain containing 15 Neighboring gene high mobility group box 3 pseudogene Neighboring gene roundabout guidance receptor 4 Neighboring gene roundabout guidance receptor 3

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    Products Interactant Other Gene Complex Source Pubs Description

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    protein binding IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    Process Evidence Code Pubs
    cell adhesion IEA
    Inferred from Electronic Annotation
    more info
     
    cell cycle IEA
    Inferred from Electronic Annotation
    more info
     
    cell cycle arrest IEA
    Inferred from Electronic Annotation
    more info
     
    cellular protein localization IDA
    Inferred from Direct Assay
    more info
    PubMed 
    regulation of growth IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    axon ISO
    Inferred from Sequence Orthology
    more info
     
    cell-cell junction ISO
    Inferred from Sequence Orthology
    more info
     
    cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    membrane IDA
    Inferred from Direct Assay
    more info
    PubMed 
    Preferred Names
    hepatocyte cell adhesion molecule
    Names
    hepacam
    protein hepaCAM

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_175189.4NP_780398.2  hepatocyte cell adhesion molecule precursor

      See identical proteins and their annotated locations for NP_780398.2

      Status: VALIDATED

      Source sequence(s)
      AW060627, BC082537, BY753058
      Consensus CDS
      CCDS22976.1
      UniProtKB/Swiss-Prot
      Q640R3
      UniProtKB/TrEMBL
      B2RSY3
      Related
      ENSMUSP00000054105.7, OTTMUSP00000018225, ENSMUST00000051839.8, OTTMUST00000040747
      Conserved Domains (3) summary
      pfam07686
      Location:41141
      V-set; Immunoglobulin V-set domain
      cd00096
      Location:164228
      Ig; Immunoglobulin domain
      cl26349
      Location:324383
      GlyL_C; dsDNA virus glycoprotein L C terminal

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000075.6 Reference GRCm38.p4 C57BL/6J

      Range
      37367606..37386572
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_006510638.2XP_006510701.1  hepatocyte cell adhesion molecule isoform X1

      See identical proteins and their annotated locations for XP_006510701.1

      Conserved Domains (2) summary
      smart00410
      Location:443
      IG_like; Immunoglobulin like
      pfam13895
      Location:343
      Ig_2; Immunoglobulin domain
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