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    POLR2E RNA polymerase II, I and III subunit E [ Macaca mulatta (Rhesus monkey) ]

    Gene ID: 721178, updated on 17-Aug-2024

    Summary

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    Official Symbol
    POLR2Eprovided by VGNC
    Official Full Name
    RNA polymerase II, I and III subunit Eprovided by VGNC
    Primary source
    VGNC:VGNC:76214
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Macaca mulatta
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
    Orthologs
    human mouse all
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    Genomic context

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    See POLR2E in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    103 current Mmul_10 (GCF_003339765.1) 19 NC_041772.1 (860504..867437, complement)
    102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 19 NC_027911.1 (859186..869442, complement)

    Chromosome 19 - NC_041772.1Genomic Context describing neighboring genes Neighboring gene ATP binding cassette subfamily A member 7 Neighboring gene Rho GTPase activating protein 45 Neighboring gene glutathione peroxidase 4 Neighboring gene strawberry notch homolog 2 Neighboring gene high mobility group protein B2 pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables DNA-directed 5'-3' RNA polymerase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of RNA polymerase I complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of RNA polymerase II, core complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of RNA polymerase III complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    DNA-directed RNA polymerases I, II, and III subunit RPABC1
    Names
    RNA polymerase II subunit E
    polymerase (RNA) II (DNA directed) polypeptide E, 25kDa

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mmul_10 Primary Assembly

    Genomic

    1. NC_041772.1 Reference Mmul_10 Primary Assembly

      Range
      860504..867437 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015122333.2 → XP_014977819.1  DNA-directed RNA polymerases I, II, and III subunit RPABC1 isoform X2

      UniProtKB/TrEMBL
      G7NL41, I2CYA3
      Conserved Domains (1) summary
      PLN03111
      Location:1 → 209
      PLN03111; DNA-directed RNA polymerase II subunit family protein; Provisional

    2. XM_015122332.2 → XP_014977818.1  DNA-directed RNA polymerases I, II, and III subunit RPABC1 isoform X2

      UniProtKB/TrEMBL
      G7NL41, I2CYA3
      Conserved Domains (1) summary
      PLN03111
      Location:1 → 209
      PLN03111; DNA-directed RNA polymerase II subunit family protein; Provisional

    3. XM_028839846.1 → XP_028695679.1  DNA-directed RNA polymerases I, II, and III subunit RPABC1 isoform X1

      UniProtKB/TrEMBL
      G7NL41
      Conserved Domains (1) summary
      PLN03111
      Location:1 → 210
      PLN03111; DNA-directed RNA polymerase II subunit family protein; Provisional

    4. XM_028839845.1 → XP_028695678.1  DNA-directed RNA polymerases I, II, and III subunit RPABC1 isoform X1

      UniProtKB/TrEMBL
      G7NL41
      Conserved Domains (1) summary
      PLN03111
      Location:1 → 210
      PLN03111; DNA-directed RNA polymerase II subunit family protein; Provisional

    5. XM_028839848.1 → XP_028695681.1  DNA-directed RNA polymerases I, II, and III subunit RPABC1 isoform X3

      Conserved Domains (1) summary
      cl29798
      Location:1 → 138
      RNA_pol_Rpb5_N; RNA polymerase Rpb5, N-terminal domain

    6. XM_028839847.1 → XP_028695680.1  DNA-directed RNA polymerases I, II, and III subunit RPABC1 isoform X3

      Conserved Domains (1) summary
      cl29798
      Location:1 → 138
      RNA_pol_Rpb5_N; RNA polymerase Rpb5, N-terminal domain
    Nucleotide Protein
    Heading Accession and Version

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