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    Mrps18c mitochondrial ribosomal protein S18C [ Mus musculus (house mouse) ]

    Gene ID: 68735, updated on 23-May-2018
    Official Symbol
    Mrps18cprovided by MGI
    Official Full Name
    mitochondrial ribosomal protein S18Cprovided by MGI
    Primary source
    MGI:MGI:1915985
    See related
    Ensembl:ENSMUSG00000016833 Vega:OTTMUSG00000026194
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    1110037D14Rik
    Expression
    Ubiquitous expression in placenta adult (RPKM 32.7), liver E14 (RPKM 32.4) and 26 other tissues See more
    Orthologs
    See Mrps18c in Genome Data Viewer
    Location:
    5; 5 E4
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) 5 NC_000071.6 (100798759..100804467)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 5 NC_000071.5 (101227778..101233486)

    Chromosome 5 - NC_000071.6Genomic Context describing neighboring genes Neighboring gene predicted gene, 36619 Neighboring gene helicase, POLQ-like Neighboring gene BRCA1 A complex subunit Neighboring gene predicted gene, 46917 Neighboring gene glycerol-3-phosphate acyltransferase 3

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (2) 

    Markers

    Homology

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    structural constituent of ribosome IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Process Evidence Code Pubs
    translation IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    cytosolic small ribosomal subunit IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    intracellular IEA
    Inferred from Electronic Annotation
    more info
     
    mitochondrial small ribosomal subunit IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    mitochondrial small ribosomal subunit ISO
    Inferred from Sequence Orthology
    more info
     
    mitochondrion HDA PubMed 
    ribosome IEA
    Inferred from Electronic Annotation
    more info
     
    Preferred Names
    28S ribosomal protein S18c, mitochondrial
    Names
    28S ribosomal protein S18-1, mitochondrial
    MRP-S18-1
    MRP-S18-c
    S18mt-c
    mrps18-c

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_026826.1NP_081102.1  28S ribosomal protein S18c, mitochondrial

      See identical proteins and their annotated locations for NP_081102.1

      Status: PROVISIONAL

      Source sequence(s)
      BC028442
      Consensus CDS
      CCDS19468.1
      UniProtKB/Swiss-Prot
      Q8R2L5
      Related
      ENSMUSP00000016977.8, OTTMUSP00000032172, ENSMUST00000016977.14, OTTMUST00000064720
      Conserved Domains (1) summary
      pfam01084
      Location:73121
      Ribosomal_S18; Ribosomal protein S18

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000071.6 Reference GRCm38.p4 C57BL/6J

      Range
      100798759..100804467
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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