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    ZAR1L zygote arrest 1 like [ Homo sapiens (human) ]

    Gene ID: 646799, updated on 11-Jun-2021

    Summary

    Official Symbol
    ZAR1Lprovided by HGNC
    Official Full Name
    zygote arrest 1 likeprovided by HGNC
    Primary source
    HGNC:HGNC:37116
    See related
    Ensembl:ENSG00000189167
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    ZAR2; Z3CXXC7
    Summary
    This gene encodes a member of the ZAR1 family that is predominantly expressed in oocytes and early embryos. The protein may function as an RNA regulator in early embryos. [provided by RefSeq, Apr 2010]
    Expression
    Low expression observed in reference dataset See more
    Orthologs
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    Genomic context

    See ZAR1L in Genome Data Viewer
    Location:
    13q13.1
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    109.20210514 current GRCh38.p13 (GCF_000001405.39) 13 NC_000013.11 (32303699..32315363, complement)
    105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 13 NC_000013.10 (32877836..32889500, complement)

    Chromosome 13 - NC_000013.11Genomic Context describing neighboring genes Neighboring gene Sharpr-MPRA regulatory region 10155 Neighboring gene FRY antisense RNA 1 Neighboring gene FRY microtubule binding protein Neighboring gene BRCA2 promoter/silencer region Neighboring gene BRCA2 DNA repair associated Neighboring gene Sharpr-MPRA regulatory region 1962 Neighboring gene interferon induced protein with tetratricopeptide repeats 1 pseudogene 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    General gene information

    Homology

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    enables mRNA binding involved in posttranscriptional gene silencing IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Process Evidence Code Pubs
    involved_in posttranscriptional gene silencing IEA
    Inferred from Electronic Annotation
    more info
     
    involved_in translation IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Component Evidence Code Pubs
    is_active_in cytoplasm IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 

    General protein information

    Preferred Names
    ZAR1-like protein
    Names
    zinc finger, 3CxxC-type 7

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_017006.2 RefSeqGene

      Range
      5001..16665
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001136571.2NP_001130043.1  ZAR1-like protein

      See identical proteins and their annotated locations for NP_001130043.1

      Status: REVIEWED

      Source sequence(s)
      AL445212, BC146956, DB457084, DB522524
      Consensus CDS
      CCDS45023.1
      UniProtKB/Swiss-Prot
      A6NP61
      Related
      ENSP00000437289.2, ENST00000533490.7
      Conserved Domains (1) summary
      pfam13695
      Location:224306
      zf-3CxxC; Zinc-binding domain

    RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20210514

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p13 Primary Assembly

    Genomic

    1. NC_000013.11 Reference GRCh38.p13 Primary Assembly

      Range
      32303699..32315363 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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