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    lamc3 laminin, gamma 3 [ Danio rerio (zebrafish) ]

    Gene ID: 558958, updated on 12-Aug-2018

    Summary

    Official Symbol
    lamc3provided by ZNC
    Official Full Name
    laminin, gamma 3provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-060531-121
    See related
    Ensembl:ENSDARG00000093572 Vega:OTTDARG00000017992
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio
    Also known as
    si:dkey-245l10.1

    Genomic context

    See lamc3 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    28
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 5 NC_007116.7 (34407365..34543314)
    105 previous assembly GRCz10 (GCF_000002035.5) 5 NC_007116.6 (33807210..33943161)

    Chromosome 5 - NC_007116.7Genomic Context describing neighboring genes Neighboring gene fibrinogen C domain containing 1 Neighboring gene uncharacterized LOC108190096 Neighboring gene uncharacterized LOC101885588 Neighboring gene allograft inflammatory factor 1-like Neighboring gene G elongation factor, mitochondrial 2 Neighboring gene hexosaminidase B (beta polypeptide)

    Genomic regions, transcripts, and products

    Pathways from BioSystems

    General gene information

    Markers

    Homology

    Gene Ontology Provided by ZFIN

    Process Evidence Code Pubs
    motor neuron axon guidance IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007116.7 Reference GRCz11 Primary Assembly

      Range
      34407365..34543314
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_682251.9XP_687343.5  laminin subunit gamma-3

      UniProtKB/TrEMBL
      F1QPJ1
      Related
      ENSDARP00000117247.1, OTTDARP00000018286, ENSDART00000145127.2
      Conserved Domains (7) summary
      smart00180
      Location:382426
      EGF_Lam; Laminin-type epidermal growth factor-like domai
      COG1842
      Location:13881607
      PspA; Phage shock protein A [Transcription, Signal transduction mechanisms]
      cd00055
      Location:710751
      EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
      pfam00052
      Location:540659
      Laminin_B; Laminin B (Domain IV)
      pfam00053
      Location:923971
      Laminin_EGF; Laminin EGF domain
      pfam00055
      Location:46268
      Laminin_N; Laminin N-terminal (Domain VI)
      cl21509
      Location:12331386
      ApoLp-III_like; Apolipophorin-III and similar insect proteins
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