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    Ccdc120 coiled-coil domain containing 120 [ Mus musculus (house mouse) ]

    Gene ID: 54648, updated on 27-Jan-2018
    Official Symbol
    Ccdc120provided by MGI
    Official Full Name
    coiled-coil domain containing 120provided by MGI
    Primary source
    MGI:MGI:1859619
    See related
    Ensembl:ENSMUSG00000031150 Vega:OTTMUSG00000017802
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Jm11; Sfc25; AA030924; DXImx50e
    Expression
    Ubiquitous expression in small intestine adult (RPKM 13.6), whole brain E14.5 (RPKM 11.7) and 23 other tissues See more
    Orthologs
    Location:
    X A1.1; X 3.48 cM
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    106 current GRCm38.p4 (GCF_000001635.24) X NC_000086.7 (7731714..7741324, complement)
    Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) X NC_000086.6 (7308840..7318450, complement)

    Chromosome X - NC_000086.7Genomic Context describing neighboring genes Neighboring gene WD repeat domain 45 Neighboring gene PRA1 domain family 2 Neighboring gene SMT3 suppressor of mif two 3 homolog 2, pseudogene (S. cerevisiae) Neighboring gene transcription factor E3 Neighboring gene predicted gene, 39487

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Targeted (2) 

    Markers

    Homology

    Clone Names

    • MGC56838

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    microtubule anchoring at centrosome ISO
    Inferred from Sequence Orthology
    more info
     
    multicellular organism development IEA
    Inferred from Electronic Annotation
    more info
     
    protein localization ISO
    Inferred from Sequence Orthology
    more info
     
    Component Evidence Code Pubs
    cell projection IEA
    Inferred from Electronic Annotation
    more info
     
    centriolar subdistal appendage ISO
    Inferred from Sequence Orthology
    more info
     
    centriole ISO
    Inferred from Sequence Orthology
    more info
     
    cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
     
    endosome IEA
    Inferred from Electronic Annotation
    more info
     
    Preferred Names
    coiled-coil domain-containing protein 120

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_207202.2NP_997085.2  coiled-coil domain-containing protein 120

      See identical proteins and their annotated locations for NP_997085.2

      Status: VALIDATED

      Source sequence(s)
      AL671995, BC053918, BU505792, BY023242
      Consensus CDS
      CCDS29972.1
      UniProtKB/Swiss-Prot
      A2AEV7
      Related
      ENSMUSP00000033490.6, OTTMUSP00000019383, ENSMUST00000033490.12, OTTMUST00000043097
      Conserved Domains (1) summary
      pfam11819
      Location:282
      DUF3338; Domain of unknown function (DUF3338)

    RefSeqs of Annotated Genomes: Mus musculus Annotation Release 106

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm38.p4 C57BL/6J

    Genomic

    1. NC_000086.7 Reference GRCm38.p4 C57BL/6J

      Range
      7731714..7741324 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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