Format

Send to:

Choose Destination
    • Showing Current items.

    SH3GL1 SH3 domain containing GRB2 like 1, endophilin A2 [ Bos taurus (cattle) ]

    Gene ID: 512719, updated on 17-Sep-2018

    Summary

    Official Symbol
    SH3GL1provided by VGNC
    Official Full Name
    SH3 domain containing GRB2 like 1, endophilin A2provided by VGNC
    Primary source
    VGNC:VGNC:34572
    See related
    BGD:BT21314; Ensembl:ENSBTAG00000006007
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs

    Genomic context

    See SH3GL1 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    106 current ARS-UCD1.2 (GCF_002263795.1) 7 NC_037334.1 (19706807..19734112)
    105 previous assembly Bos_taurus_UMD_3.1.1 (GCF_000003055.6) 7 AC_000164.1 (20923745..20951051)

    Chromosome 7 - NC_037334.1Genomic Context describing neighboring genes Neighboring gene UBX domain protein 6 Neighboring gene chromatin assembly factor 1 subunit A Neighboring gene MPN domain containing Neighboring gene signal transducing adaptor family member 2

    Genomic regions, transcripts, and products

    Pathways from BioSystems

    • Endocytosis, organism-specific biosystem (from KEGG)
      Endocytosis, organism-specific biosystemEndocytosis is a mechanism for cells to remove ligands, nutrients, and plasma membrane (PM) proteins, and lipids from the cell surface, bringing them into the cell interior. Transmembrane proteins en...
    • Endocytosis, conserved biosystem (from KEGG)
      Endocytosis, conserved biosystemEndocytosis is a mechanism for cells to remove ligands, nutrients, and plasma membrane (PM) proteins, and lipids from the cell surface, bringing them into the cell interior. Transmembrane proteins en...

    General gene information

    Markers

    Homology

    Clone Names

    • MGC128778

    Gene Ontology Provided by GOA

    Function Evidence Code Pubs
    identical protein binding IEA
    Inferred from Electronic Annotation
    more info
     
    lipid binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    synaptic vesicle uncoating IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    cell junction IEA
    Inferred from Electronic Annotation
    more info
     
    cell projection IEA
    Inferred from Electronic Annotation
    more info
     
    cytosol IEA
    Inferred from Electronic Annotation
    more info
     
    early endosome membrane IEA
    Inferred from Electronic Annotation
    more info
     
    glutamatergic synapse IEA
    Inferred from Electronic Annotation
    more info
     
    podosome IEA
    Inferred from Electronic Annotation
    more info
     
    presynapse IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    endophilin-A2
    Names
    SH3 domain protein 2B
    SH3 domain-containing GRB2-like protein 1
    SH3-domain GRB2-like 1
    endophilin-2

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001046130.2NP_001039595.1  endophilin-A2

      See identical proteins and their annotated locations for NP_001039595.1

      Status: PROVISIONAL

      Source sequence(s)
      BC105444
      UniProtKB/Swiss-Prot
      Q2KJA1
      Related
      ENSBTAP00000007890.3, ENSBTAT00000007890.3
      Conserved Domains (2) summary
      cd11803
      Location:309363
      SH3_Endophilin_A; Src homology 3 domain of Endophilin-A
      cl12013
      Location:25247
      BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature

    RefSeqs of Annotated Genomes: Bos taurus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD1.2 Primary Assembly

    Genomic

    1. NC_037334.1 Reference ARS-UCD1.2 Primary Assembly

      Range
      19706807..19734112
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005208933.3XP_005208990.1  endophilin-A2 isoform X1

      See identical proteins and their annotated locations for XP_005208990.1

      UniProtKB/Swiss-Prot
      Q2KJA1
      Conserved Domains (2) summary
      cd11803
      Location:310364
      SH3_Endophilin_A; Src homology 3 domain of Endophilin-A
      cl12013
      Location:25247
      BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature
    Support Center