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    Spz1 spermatogenic leucine zipper 1 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 499510, updated on 2-Oct-2018

    Summary

    Official Symbol
    Spz1provided by RGD
    Official Full Name
    spermatogenic leucine zipper 1provided by RGD
    Primary source
    RGD:1562395
    See related
    Ensembl:ENSRNOG00000013050
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Orthologs

    Genomic context

    See Spz1 in Genome Data Viewer
    Location:
    2q12
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    106 current Rnor_6.0 (GCF_000001895.5) 2 NC_005101.4 (22145457..22147053, complement)
    104 previous assembly Rnor_5.0 (GCF_000001895.4) 2 NC_005101.3 (41348984..41350580, complement)

    Chromosome 2 - NC_005101.4Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 151, member B Neighboring gene zinc finger FYVE-type containing 16 Neighboring gene hypothetical LOC365643 Neighboring gene serine incorporator 5

    Genomic regions, transcripts, and products

    General gene information

    Homology

    Gene Ontology Provided by RGD

    Function Evidence Code Pubs
    DNA binding IEA
    Inferred from Electronic Annotation
    more info
     
    DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    regulation of transcription, DNA-templated IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    nucleus ISO
    Inferred from Sequence Orthology
    more info
     

    General protein information

    Preferred Names
    spermatogenic leucine zipper protein 1
    Names
    spermatogenic Zip 1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001024297.1NP_001019468.1  spermatogenic leucine zipper protein 1

      See identical proteins and their annotated locations for NP_001019468.1

      Status: PROVISIONAL

      Source sequence(s)
      BC079262
      UniProtKB/Swiss-Prot
      Q6AXY9
      Related
      ENSRNOP00000017408.5, ENSRNOT00000017408.6
      Conserved Domains (1) summary
      PHA02896
      Location:66213
      PHA02896; A-type inclusion like protein; Provisional

    RefSeqs of Annotated Genomes: Rattus norvegicus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Rnor_6.0 Primary Assembly

    Genomic

    1. NC_005101.4 Reference Rnor_6.0 Primary Assembly

      Range
      22145457..22147053 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate Rn_Celera

    Genomic

    1. AC_000070.1 Alternate Rn_Celera

      Range
      19886565..19888161 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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