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    cetp cholesteryl ester transfer protein, plasma [ Danio rerio (zebrafish) ]

    Gene ID: 492488, updated on 21-Oct-2018

    Summary

    Official Symbol
    cetpprovided by ZNC
    Official Full Name
    cholesteryl ester transfer protein, plasmaprovided by ZNC
    Primary source
    ZFIN:ZDB-GENE-041114-54
    See related
    Ensembl:ENSDARG00000030872 Vega:OTTDARG00000012990
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio
    Also known as
    zgc:103675
    Orthologs

    Genomic context

    See cetp in Genome Data Viewer
    Location:
    chromosome: 18
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 18 NC_007129.7 (17611476..17621850)
    105 previous assembly GRCz10 (GCF_000002035.5) 18 NC_007129.6 (17622410..17632800)

    Chromosome 18 - NC_007129.7Genomic Context describing neighboring genes Neighboring gene solute carrier family 12 (sodium/chloride transporter), member 3 Neighboring gene homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 Neighboring gene NLR family, CARD domain containing 5 Neighboring gene copine II

    Genomic regions, transcripts, and products

    Pathways from BioSystems

    General gene information

    Markers

    Homology

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    cholesterol binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    cholesterol transporter activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    cholesterol transporter activity IEA
    Inferred from Electronic Annotation
    more info
     
    lipid binding IEA
    Inferred from Electronic Annotation
    more info
     
    phosphatidylcholine binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    phospholipid transporter activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    triglyceride binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Process Evidence Code Pubs
    cholesterol homeostasis IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    cholesterol metabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    cholesterol metabolic process IEA
    Inferred from Electronic Annotation
    more info
     
    high-density lipoprotein particle remodeling IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    lipid metabolic process IEA
    Inferred from Electronic Annotation
    more info
     
    lipid transport IEA
    Inferred from Electronic Annotation
    more info
     
    low-density lipoprotein particle remodeling IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    phosphatidylcholine metabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    phospholipid homeostasis IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    regulation of cholesterol efflux IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    reverse cholesterol transport IEA
    Inferred from Electronic Annotation
    more info
     
    steroid metabolic process IEA
    Inferred from Electronic Annotation
    more info
     
    triglyceride homeostasis IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    triglyceride metabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    triglyceride transport IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    very-low-density lipoprotein particle remodeling IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Component Evidence Code Pubs
    extracellular region IEA
    Inferred from Electronic Annotation
    more info
     
    high-density lipoprotein particle IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    high-density lipoprotein particle IEA
    Inferred from Electronic Annotation
    more info
     
    vesicle IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 

    General protein information

    Preferred Names
    cholesteryl ester transfer protein

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001007360.1NP_001007361.1  cholesteryl ester transfer protein precursor

      See identical proteins and their annotated locations for NP_001007361.1

      Status: PROVISIONAL

      Source sequence(s)
      BC085584
      UniProtKB/TrEMBL
      Q5U3E2
      Related
      ENSDARP00000046890.6, OTTDARP00000013068, ENSDART00000046891.7, OTTDART00000015394
      Conserved Domains (1) summary
      cl00188
      Location:31256
      BPI; BPI/LBP/CETP domain; Bactericidal permeability-increasing protein (BPI) / Lipopolysaccharide-binding protein (LBP) / Cholesteryl ester transfer protein (CETP) domain; binds to and neutralizes lipopolysaccharides from the outer membrane of Gram-negative ...

    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007129.7 Reference GRCz11 Primary Assembly

      Range
      17611476..17621850
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_009293552.3XP_009291827.1  cholesteryl ester transfer protein isoform X1

      Conserved Domains (1) summary
      cl00188
      Location:31281
      BPI; BPI/LBP/CETP domain; Bactericidal permeability-increasing protein (BPI) / Lipopolysaccharide-binding protein (LBP) / Cholesteryl ester transfer protein (CETP) domain; binds to and neutralizes lipopolysaccharides from the outer membrane of Gram-negative ...
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