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    MMP25 matrix metallopeptidase 25 [ Canis lupus familiaris (dog) ]

    Gene ID: 490046, updated on 21-Oct-2017

    Summary

    Official Symbol
    MMP25provided by VGNC
    Official Full Name
    matrix metallopeptidase 25provided by VGNC
    Primary source
    VGNC:VGNC:43284
    See related
    Ensembl:ENSCAFG00000019309
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs

    Genomic context

    See MMP25 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    105 current CanFam3.1 (GCF_000002285.3) 6 NC_006588.3 (38128585..38139882, complement)

    Chromosome 6 - NC_006588.3Genomic Context describing neighboring genes Neighboring gene interleukin 32 Neighboring gene 60S ribosomal protein L21 pseudogene Neighboring gene BICD family like cargo adaptor 2 Neighboring gene THO complex 6 Neighboring gene host cell factor C1 regulator 1

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_006588.3 Chromosome 6 Reference CanFam3.1 Primary Assembly

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Pathways from BioSystems

    General gene information

    Homology

    General protein information

    Preferred Names
    matrix metalloproteinase-25; LOW QUALITY PROTEIN: matrix metalloproteinase-25

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 105 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference CanFam3.1 Primary Assembly

    Genomic

    1. NC_006588.3 Reference CanFam3.1 Primary Assembly

      Range
      38128585..38139882 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_547166.5XP_547166.3  LOW QUALITY PROTEIN: matrix metalloproteinase-25

      Related
      ENSCAFP00000028515.4, ENSCAFT00000030681.4
      Conserved Domains (4) summary
      cd00094
      Location:313507
      HX; Hemopexin-like repeats.; Hemopexin is a heme-binding protein that transports heme to the liver. Hemopexin-like repeats occur in vitronectin and some matrix metalloproteinases family (matrixins). The HX repeats of some matrixins bind tissue inhibitor of ...
      cd04278
      Location:114279
      ZnMc_MMP; Zinc-dependent metalloprotease, matrix metalloproteinase (MMP) sub-family. MMPs are responsible for a great deal of pericellular proteolysis of extracellular matrix and cell surface molecules, playing crucial roles in morphogenesis, cell fate ...
      pfam00413
      Location:114279
      Peptidase_M10; Matrixin
      pfam01471
      Location:2282
      PG_binding_1; Putative peptidoglycan binding domain
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