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    FAAP24 FA core complex associated protein 24 [ Canis lupus familiaris (dog) ]

    Gene ID: 476496, updated on 26-Sep-2018

    Summary

    Official Symbol
    FAAP24provided by VGNC
    Official Full Name
    FA core complex associated protein 24provided by VGNC
    Primary source
    VGNC:VGNC:40557
    See related
    Ensembl:ENSCAFG00000029358
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Also known as
    C1H19orf40
    Orthologs

    Genomic context

    See FAAP24 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    105 current CanFam3.1 (GCF_000002285.3) 1 NC_006583.3 (119119920..119124964, complement)

    Chromosome 1 - NC_006583.3Genomic Context describing neighboring genes Neighboring gene G-patch domain containing 1 Neighboring gene rhophilin Rho GTPase binding protein 2 Neighboring gene uncharacterized LOC111098365 Neighboring gene centrosomal protein 89 Neighboring gene solute carrier family 7 member 9

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_006583.3 Chromosome 1 Reference CanFam3.1 Primary Assembly

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Pathways from BioSystems

    • FA core complex, organism-specific biosystem (from KEGG)
      FA core complex, organism-specific biosystemStructural complex; Genetic information processing; Repair system
    • FA core complex, conserved biosystem (from KEGG)
      FA core complex, conserved biosystemStructural complex; Genetic information processing; Repair system
    • Fanconi anemia pathway, organism-specific biosystem (from KEGG)
      Fanconi anemia pathway, organism-specific biosystemThe Fanconi anemia pathway is required for the efficient repair of damaged DNA, especially interstrand cross-links (ICLs). DNA ICL is directly recognized by FANCM and associated proteins, that recrui...
    • Fanconi anemia pathway, conserved biosystem (from KEGG)
      Fanconi anemia pathway, conserved biosystemThe Fanconi anemia pathway is required for the efficient repair of damaged DNA, especially interstrand cross-links (ICLs). DNA ICL is directly recognized by FANCM and associated proteins, that recrui...

    General gene information

    Homology

    General protein information

    Preferred Names
    Fanconi anemia core complex-associated protein 24
    Names
    Fanconi anemia core complex associated protein 24

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 105 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference CanFam3.1 Primary Assembly

    Genomic

    1. NC_006583.3 Reference CanFam3.1 Primary Assembly

      Range
      119119920..119124964 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_022426345.1XP_022282053.1  Fanconi anemia core complex-associated protein 24 isoform X1

      Conserved Domains (2) summary
      pfam12826
      Location:144193
      HHH_2; Helix-hairpin-helix motif
      cl27383
      Location:87192
      ERCC4; ERCC4 domain
    2. XM_014120857.2XP_013976332.1  Fanconi anemia core complex-associated protein 24 isoform X4

      Conserved Domains (1) summary
      pfam12826
      Location:149198
      HHH_2; Helix-hairpin-helix motif
    3. XM_014120853.2XP_013976328.1  Fanconi anemia core complex-associated protein 24 isoform X2

      Conserved Domains (1) summary
      pfam12826
      Location:168217
      HHH_2; Helix-hairpin-helix motif
    4. XM_005616774.3XP_005616831.1  Fanconi anemia core complex-associated protein 24 isoform X1

      Conserved Domains (2) summary
      pfam12826
      Location:144193
      HHH_2; Helix-hairpin-helix motif
      cl27383
      Location:87192
      ERCC4; ERCC4 domain
    5. XM_005616772.3XP_005616829.1  Fanconi anemia core complex-associated protein 24 isoform X3

      See identical proteins and their annotated locations for XP_005616829.1

      Related
      ENSCAFP00000036682.1, ENSCAFT00000042873.1
      Conserved Domains (2) summary
      pfam12826
      Location:166215
      HHH_2; Helix-hairpin-helix motif
      cl27383
      Location:109214
      ERCC4; ERCC4 domain
    6. XM_014120863.2XP_013976338.1  Fanconi anemia core complex-associated protein 24 isoform X6

      Conserved Domains (1) summary
      pfam12826
      Location:70119
      HHH_2; Helix-hairpin-helix motif
    7. XM_014120861.2XP_013976336.1  Fanconi anemia core complex-associated protein 24 isoform X5

      Conserved Domains (1) summary
      pfam12826
      Location:104153
      HHH_2; Helix-hairpin-helix motif
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