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    TAP2 transporter 2, ATP binding cassette subfamily B member [ Canis lupus familiaris (dog) ]

    Gene ID: 474864, updated on 10-Sep-2017

    Summary

    Gene symbol
    TAP2
    Gene description
    transporter 2, ATP binding cassette subfamily B member
    See related
    Ensembl:ENSCAFG00000000823
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Also known as
    APT2
    Orthologs

    Genomic context

    See TAP2 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    105 current CanFam3.1 (GCF_000002285.3) 12 NC_006594.3 (2407512..2417469, complement)

    Chromosome 12 - NC_006594.3Genomic Context describing neighboring genes Neighboring gene MHC DLA Class II DRB pseudogene DRB2 Neighboring gene major histocompatibility complex, class II, DO beta Neighboring gene proteasome subunit beta 8 Neighboring gene transporter 1, ATP binding cassette subfamily B member

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_006594.3 Chromosome 12 Reference CanFam3.1 Primary Assembly

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Pathways from BioSystems

    General gene information

    Homology

    General protein information

    Preferred Names
    antigen peptide transporter 2
    Names
    ATP-binding cassette sub-family B (MDR/TAP)
    transporter 2, ATP-binding cassette, sub-family B (MDR-TAP)
    transporter associated with antigen presentation 2

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001284495.1NP_001271424.1  antigen peptide transporter 2 precursor

      See identical proteins and their annotated locations for NP_001271424.1

      Status: PROVISIONAL

      Source sequence(s)
      JN656400
      UniProtKB/TrEMBL
      H8ZYY8
      Conserved Domains (3) summary
      TIGR00958
      Location:1697
      3a01208; Conjugate Transporter-2 (CT2) Family protein
      pfam00664
      Location:156416
      ABC_membrane; ABC transporter transmembrane region
      cl21455
      Location:457680
      P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 105 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference CanFam3.1 Primary Assembly

    Genomic

    1. NC_006594.3 Reference CanFam3.1 Primary Assembly

      Range
      2407512..2417469 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005627192.3XP_005627249.1  antigen peptide transporter 2 isoform X1

      See identical proteins and their annotated locations for XP_005627249.1

      UniProtKB/TrEMBL
      H8ZYY8
      Conserved Domains (3) summary
      TIGR00958
      Location:1697
      3a01208; Conjugate Transporter-2 (CT2) Family protein
      pfam00664
      Location:156416
      ABC_membrane; ABC transporter transmembrane region
      cl21455
      Location:457680
      P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
    2. XM_005627193.3XP_005627250.1  antigen peptide transporter 2 isoform X1

      See identical proteins and their annotated locations for XP_005627250.1

      UniProtKB/TrEMBL
      H8ZYY8
      Related
      ENSCAFP00000001183.3, ENSCAFT00000001291.3
      Conserved Domains (3) summary
      TIGR00958
      Location:1697
      3a01208; Conjugate Transporter-2 (CT2) Family protein
      pfam00664
      Location:156416
      ABC_membrane; ABC transporter transmembrane region
      cl21455
      Location:457680
      P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
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