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    CETP cholesteryl ester transfer protein [ Pan troglodytes (chimpanzee) ]

    Gene ID: 467982, updated on 6-Oct-2018

    Summary

    Official Symbol
    CETPprovided by VGNC
    Official Full Name
    cholesteryl ester transfer proteinprovided by VGNC
    Primary source
    VGNC:VGNC:9022
    Locus tag
    CK820_G0016613
    See related
    Ensembl:ENSPTRG00000008145
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pan troglodytes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
    Orthologs

    Genomic context

    See CETP in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    105 current Clint_PTRv2 (GCF_002880755.1) 16 NC_036895.1 (42056243..42080118)
    103 previous assembly Pan_troglodytes-2.1.4 (GCF_000001515.6) 16 NC_006483.3 (56042474..56068271)

    Chromosome 16 - NC_036895.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA U3 Neighboring gene homocysteine inducible ER protein with ubiquitin like domain 1 Neighboring gene NLR family CARD domain containing 5 Neighboring gene cilia- and flagella-associated protein 69-like Neighboring gene copine 2

    Genomic regions, transcripts, and products

    Expression

    • Project title: Tissue-specific RNA-sequencing for ten non-human primate species
    • Description: Total RNA sequencing of fifteen different tissues for ten non-human primates
    • BioProject: PRJNA271912
    • Publication: PMID 25392405
    • Analysis date: Tue Apr 3 07:13:10 2018

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Pathways from BioSystems

    • Statin Pathway PharmGKB, organism-specific biosystem (from WikiPathways)
      Statin Pathway PharmGKB, organism-specific biosystemWhat are statins? See Wikipedia at: http://en.wikipedia.org/wiki/Statin More about this pathway and statins: https://www.pharmgkb.org/do/serve?objId=PA2031&objCls=Pathway

    General gene information

    Markers

    Homology

    General protein information

    Preferred Names
    cholesteryl ester transfer protein
    Names
    cholesteryl ester transfer protein, plasma

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Pan troglodytes Annotation Release 105 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Clint_PTRv2 Primary Assembly

    Genomic

    1. NC_036895.1 Reference Clint_PTRv2 Primary Assembly

      Range
      42056243..42080118
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_016929890.1XP_016785379.1  cholesteryl ester transfer protein isoform X1

      Related
      ENSPTRP00000087924.1, ENSPTRT00000100423.1
      Conserved Domains (2) summary
      smart00328
      Location:31257
      BPI1; BPI/LBP/CETP N-terminal domain
      cl00188
      Location:243480
      BPI; BPI/LBP/CETP domain; Bactericidal permeability-increasing protein (BPI) / Lipopolysaccharide-binding protein (LBP) / Cholesteryl ester transfer protein (CETP) domain; binds to and neutralizes lipopolysaccharides from the outer membrane of Gram-negative ...
    2. XM_024349849.1XP_024205617.1  cholesteryl ester transfer protein isoform X2

      Conserved Domains (2) summary
      cd00025
      Location:27254
      BPI1; BPI/LBP/CETP N-terminal domain; Bactericidal permeability-increasing protein (BPI) / Lipopolysaccharide-binding protein (LBP) / Cholesteryl ester transfer protein (CETP) N-terminal domain; binds to and neutralizes lipopolysaccharides from the outer ...
      cl00188
      Location:250438
      BPI; BPI/LBP/CETP domain; Bactericidal permeability-increasing protein (BPI) / Lipopolysaccharide-binding protein (LBP) / Cholesteryl ester transfer protein (CETP) domain; binds to and neutralizes lipopolysaccharides from the outer membrane of Gram-negative ...
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