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    SAMHD1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 [ Pan troglodytes (chimpanzee) ]

    Gene ID: 458223, updated on 25-May-2019

    Summary

    Official Symbol
    SAMHD1provided by VGNC
    Official Full Name
    SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1provided by VGNC
    Primary source
    VGNC:VGNC:10305
    Locus tag
    CK820_G0020182
    See related
    Ensembl:ENSPTRG00000013468
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Pan troglodytes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
    Orthologs

    Genomic context

    See SAMHD1 in Genome Data Viewer
    Location:
    chromosome: 20
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    105 current Clint_PTRv2 (GCF_002880755.1) 20 NC_036899.1 (36446881..36508761, complement)
    104 previous assembly Pan_tro 3.0 (GCF_000001515.7) 20 NC_006487.4 (38412715..38474571, complement)
    103 previous assembly Pan_troglodytes-2.1.4 (GCF_000001515.6) 20 NC_006487.3 (33773373..33833213, complement)

    Chromosome 20 - NC_036899.1Genomic Context describing neighboring genes Neighboring gene DSN1 component of MIS12 kinetochore complex Neighboring gene suppressor of glucose, autophagy associated 1 Neighboring gene TBC/LysM-associated domain containing 2 Neighboring gene ribosomal protein S8 pseudogene Neighboring gene ubiquitin-40S ribosomal protein S27a pseudogene Neighboring gene RB transcriptional corepressor like 1 Neighboring gene maestro heat like repeat family member 8 Neighboring gene ribophorin II

    Genomic regions, transcripts, and products

    General gene information

    Markers

    Homology

    General protein information

    Preferred Names
    deoxynucleoside triphosphate triphosphohydrolase SAMHD1
    Names
    SAM domain and HD domain 1
    SAM domain- and HD domain-containing protein 1
    NP_001267439.1
    XP_016792623.1
    XP_016792624.1
    XP_016792625.1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001280510.1NP_001267439.1  deoxynucleoside triphosphate triphosphohydrolase SAMHD1

      See identical proteins and their annotated locations for NP_001267439.1

      Status: PROVISIONAL

      Source sequence(s)
      JQ085411
      UniProtKB/TrEMBL
      H6WE97
      Related
      ENSPTRP00000023119.5, ENSPTRT00000025051.5
      Conserved Domains (2) summary
      cd09508
      Location:41110
      SAM_HD; SAM domain of HD-phosphohydrolase
      cl26231
      Location:115504
      YdhJ; HD superfamily phosphohydrolase [General function prediction only]

    RefSeqs of Annotated Genomes: Pan troglodytes Annotation Release 105 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Clint_PTRv2 Primary Assembly

    Genomic

    1. NC_036899.1 Reference Clint_PTRv2 Primary Assembly

      Range
      36446881..36508761 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_016937136.2XP_016792625.1  deoxynucleoside triphosphate triphosphohydrolase SAMHD1 isoform X3

    2. XM_016937134.2XP_016792623.1  deoxynucleoside triphosphate triphosphohydrolase SAMHD1 isoform X1

    3. XM_016937135.1XP_016792624.1  deoxynucleoside triphosphate triphosphohydrolase SAMHD1 isoform X2

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