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    CG11980 [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 41078, updated on 28-Aug-2019

    Summary

    Official Symbol
    CG11980provided by FlyBase
    Primary source
    FLYBASE:FBgn0037652
    Locus tag
    Dmel_CG11980
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    anon-WO0118547.327; Dmel\CG11980

    Genomic context

    See CG11980 in Genome Data Viewer
    Location:
    85C2-85C2; 3-48 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    Release 6.26 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (9004017..9005331)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (4829739..4831053)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Proteasome beta3 subunit Neighboring gene Iruka Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Homology

    • Homologs of the CG11980 gene: The CG11980 gene is conserved in human, chimpanzee, Rhesus monkey, dog, cow, mouse, rat, chicken, zebrafish, mosquito, C.elegans, S.cerevisiae, K.lactis, E.gossypii, S.pombe, M.oryzae, N.crassa, A.thaliana, rice, and frog.
    • Orthologs

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 

    General protein information

    Preferred Names
    uncharacterized protein
    Names
    CG11980-PA
    CG11980-PB
    CG11980-PC

    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      9004017..9005331
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_141600.2NP_649857.1  uncharacterized protein Dmel_CG11980, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_649857.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8INP9
      Related
      FBpp0081443, FBtr0081963
      Conserved Domains (1) summary
      pfam03690
      Location:28352
      UPF0160; uncharacterized protein family (UPF0160)
    2. NM_169250.2NP_731302.1  uncharacterized protein Dmel_CG11980, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_731302.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8INP8
      Related
      FBpp0081442, FBtr0081962
      Conserved Domains (1) summary
      pfam03690
      Location:27351
      UPF0160; uncharacterized protein family (UPF0160)
    3. NM_169251.1NP_731303.2  uncharacterized protein Dmel_CG11980, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_731303.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VHI8
      Related
      FBpp0081444, FBtr0081964
      Conserved Domains (1) summary
      pfam03690
      Location:14338
      UPF0160; uncharacterized protein family (UPF0160)
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