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    YBX3 Y-box binding protein 3 [ Gallus gallus (chicken) ]

    Gene ID: 396371, updated on 20-Jun-2018

    Summary

    Symbol
    YBX3provided by CGNC
    Full Name
    Y-box binding protein 3provided by CGNC
    Primary source
    CGNC:49776
    See related
    Ensembl:ENSGALG00000031890
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    CSDA
    Orthologs

    Genomic context

    See YBX3 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    104 current GRCg6a (GCF_000002315.5) 1 NC_006088.5 (79075430..79099953)
    103 previous assembly Gallus_gallus-5.0 (GCF_000002315.4) 1 NC_006088.4 (78318610..78343170)

    Chromosome 1 - NC_006088.5Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112530256 Neighboring gene uncharacterized LOC769044 Neighboring gene uncharacterized LOC100859625 Neighboring gene synaptonemal complex central element protein 3 Neighboring gene serine/threonine/tyrosine kinase 1 Neighboring gene GABA type A receptor associated protein like 1

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Pathways from BioSystems

    • Tight junction, organism-specific biosystem (from KEGG)
      Tight junction, organism-specific biosystemTight junctions (TJs) are essential for establishing a selectively permeable barrier to diffusion through the paracellular space between neighboring cells. TJs are composed of at least three types of...
    • Tight junction, conserved biosystem (from KEGG)
      Tight junction, conserved biosystemTight junctions (TJs) are essential for establishing a selectively permeable barrier to diffusion through the paracellular space between neighboring cells. TJs are composed of at least three types of...

    General gene information

    Homology

    General protein information

    Preferred Names
    Y-box-binding protein 3
    Names
    Rous sarcoma virus transcription enhancer factor II
    cold shock domain protein A

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_205406.2NP_990737.2  Y-box-binding protein 3

      Status: VALIDATED

      Source sequence(s)
      BU373063, BX258902, CD218569
      UniProtKB/TrEMBL
      A0A1D5NWH9
      Related
      ENSGALP00000044719.1, ENSGALT00000072603.2
      Conserved Domains (1) summary
      pfam00313
      Location:81150
      CSD; 'Cold-shock' DNA-binding domain

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCg6a Primary Assembly

    Genomic

    1. NC_006088.5 Reference GRCg6a Primary Assembly

      Range
      79075430..79099953
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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