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    pdcd2 programmed cell death 2 [ Danio rerio (zebrafish) ]

    Gene ID: 393370, updated on 9-Apr-2018
    Official Symbol
    pdcd2provided by ZNC
    Official Full Name
    programmed cell death 2provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-040426-1236
    See related
    Ensembl:ENSDARG00000007892 Vega:OTTDARG00000018239
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio
    Also known as
    zgc:63685
    Orthologs
    Location:
    chromosome: 13
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 13 NC_007124.7 (24380132..24383805)
    105 previous assembly GRCz10 (GCF_000002035.5) 13 NC_007124.6 (24249682..24253355)

    Chromosome 13 - NC_007124.7Genomic Context describing neighboring genes Neighboring gene si:ch211-202m22.1 Neighboring gene ras homolog family member Ua Neighboring gene TATA box binding protein Neighboring gene zgc:153169 Neighboring gene RAB1A, member RAS oncogene family b

    Homology

    Clone Names

    • MGC63685

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    metal ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    erythrocyte differentiation IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    hematopoietic stem cell differentiation IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    regulation of mitotic nuclear division IMP
    Inferred from Mutant Phenotype
    more info
    PubMed 
    Component Evidence Code Pubs
    cytoplasm IEA
    Inferred from Electronic Annotation
    more info
     
    Preferred Names
    programmed cell death protein 2

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001045138.1NP_001038603.1  programmed cell death protein 2

      Status: PROVISIONAL

      Source sequence(s)
      AL772388
      UniProtKB/TrEMBL
      Q1MTH6
      Related
      ENSDARP00000017163.6, OTTDARP00000018531, ENSDART00000022682.7, OTTDART00000022071
      Conserved Domains (2) summary
      pfam01753
      Location:145182
      zf-MYND; MYND finger
      pfam04194
      Location:238351
      PDCD2_C; Programmed cell death protein 2, C-terminal putative domain

    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007124.7 Reference GRCz11 Primary Assembly

      Range
      24380132..24383805
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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