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    cotl1 coactosin-like F-actin binding protein 1 [ Danio rerio (zebrafish) ]

    Gene ID: 336381, updated on 10-Oct-2019

    Summary

    Official Symbol
    cotl1provided by ZNC
    Official Full Name
    coactosin-like F-actin binding protein 1provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-030131-8325
    See related
    Ensembl:ENSDARG00000026829
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio
    Also known as
    zgc:63983; wu:fb08h08
    Orthologs

    Genomic context

    See cotl1 in Genome Data Viewer
    Location:
    chromosome: 18
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 18 NC_007129.7 (13203966..13216670)
    105 previous assembly GRCz10 (GCF_000002035.5) 18 NC_007129.6 (13235454..13248158)
    103 previous assembly Zv9 (GCF_000002035.4) 18 NC_007129.5 (12680642..12693346)

    Chromosome 18 - NC_007129.7Genomic Context describing neighboring genes Neighboring gene tyrosine aminotransferase Neighboring gene zgc:56622 Neighboring gene kelch-like family member 36 Neighboring gene MTOR associated protein, eak-7 homolog Neighboring gene phospholipase C, gamma 2

    Genomic regions, transcripts, and products

    Pathways from BioSystems

    General gene information

    Markers

    Homology

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    actin binding IEA
    Inferred from Electronic Annotation
    more info
     
    actin filament binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Process Evidence Code Pubs
    regulation of actin filament polymerization IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Component Evidence Code Pubs
    colocalizes_with actin filament IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    cortical actin cytoskeleton IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    site of polarized growth IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 

    General protein information

    Preferred Names
    coactosin-like protein
    Names
    coactosin-like 1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_200012.1NP_956306.1  coactosin-like protein

      See identical proteins and their annotated locations for NP_956306.1

      Status: PROVISIONAL

      Source sequence(s)
      BC057423
      UniProtKB/TrEMBL
      Q6PFT7
      Related
      ENSDARP00000037758.6, ENSDART00000032151.7
      Conserved Domains (1) summary
      cd11282
      Location:9120
      ADF_coactosin_like; Coactosin-like members of the ADF homology domain family

    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007129.7 Reference GRCz11 Primary Assembly

      Range
      13203966..13216670
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCz11 ALT_DRER_TU_1

    Genomic

    1. NW_018395011.1 Reference GRCz11 ALT_DRER_TU_1

      Range
      191358..191916
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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