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    ppme1 protein phosphatase methylesterase 1 [ Danio rerio (zebrafish) ]

    Gene ID: 335124, updated on 12-Aug-2018

    Summary

    Official Symbol
    ppme1provided by ZNC
    Official Full Name
    protein phosphatase methylesterase 1provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-030131-7064
    See related
    Ensembl:ENSDARG00000009771 Vega:OTTDARG00000022697
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio
    Also known as
    fk72d03; zgc:56239; wu:fk72d03
    Orthologs

    Genomic context

    See ppme1 in Genome Data Viewer
    Location:
    chromosome: 21
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 21 NC_007132.7 (25380675..25395155, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 21 NC_007132.6 (25344070..25358550, complement)

    Chromosome 21 - NC_007132.7Genomic Context describing neighboring genes Neighboring gene odorant receptor, family H, subfamily 132, member 3 Neighboring gene odorant receptor, family H, subfamily 132, member 4 Neighboring gene odorant receptor, family H, subfamily 132, member 5 Neighboring gene spermine synthase Neighboring gene uncharacterized LOC101886303 Neighboring gene connector enhancer of kinase suppressor of Ras 2b

    Genomic regions, transcripts, and products

    General gene information

    Markers

    Homology

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    carboxylic ester hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
     
    catalytic activity IEA
    Inferred from Electronic Annotation
    more info
     
    hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
     
    protein methylesterase activity IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    protein demethylation IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    protein demethylation IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    cellular_component ND
    No biological Data available
    more info
     

    General protein information

    Preferred Names
    protein phosphatase methylesterase 1
    NP_956231.1

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_199937.1NP_956231.1  protein phosphatase methylesterase 1

      See identical proteins and their annotated locations for NP_956231.1

      Status: PROVISIONAL

      Source sequence(s)
      BC046016
      UniProtKB/TrEMBL
      Q7ZV37
      Related
      ENSDARP00000018567.7, OTTDARP00000023962, ENSDART00000016219.9, OTTDART00000029341
      Conserved Domains (3) summary
      COG0596
      Location:69367
      MhpC; Pimeloyl-ACP methyl ester carboxylesterase [Coenzyme transport and metabolism, General function prediction only]
      pfam12695
      Location:74165
      Abhydrolase_5; Alpha/beta hydrolase family
      cl17036
      Location:265303
      SH3; Src Homology 3 domain superfamily

    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007132.7 Reference GRCz11 Primary Assembly

      Range
      25380675..25395155 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
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