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    CACNA1A calcium voltage-gated channel subunit alpha1 A [ Bos taurus (cattle) ]

    Gene ID: 282648, updated on 9-Jan-2020

    Summary

    Official Symbol
    CACNA1Aprovided by VGNC
    Official Full Name
    calcium voltage-gated channel subunit alpha1 Aprovided by VGNC
    Primary source
    VGNC:VGNC:26672
    See related
    Ensembl:ENSBTAG00000014828
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    CAV2.1
    Orthologs

    Genomic context

    See CACNA1A in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    49
    Annotation release Status Assembly Chr Location
    106 current ARS-UCD1.2 (GCF_002263795.1) 7 NC_037334.1 (12144008..12397316)
    105 previous assembly Bos_taurus_UMD_3.1.1 (GCF_000003055.6) 7 AC_000164.1 (13249278..13506235)

    Chromosome 7 - NC_037334.1Genomic Context describing neighboring genes Neighboring gene 40S ribosomal protein S29-like Neighboring gene uncharacterized protein C6orf203-like Neighboring gene transfer RNA glycine (anticodon UCC) Neighboring gene uncharacterized LOC112447340 Neighboring gene transfer RNA glycine (anticodon UCC) Neighboring gene uncharacterized LOC101906392 Neighboring gene immediate early response 2 Neighboring gene transfer RNA glycine (anticodon UCC) Neighboring gene syntaxin 10

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Pathways from PubChem

    General gene information

    Markers

    Homology

    General protein information

    Preferred Names
    voltage-dependent P/Q-type calcium channel subunit alpha-1A
    Names
    calcium channel, alpha 1A subunit
    calcium channel, voltage-dependent, P/Q type, alpha 1A subunit
    voltage-gated calcium channel alpha 1A subunit

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001075129.1NP_001068597.1  voltage-dependent P/Q-type calcium channel subunit alpha-1A

      See identical proteins and their annotated locations for NP_001068597.1

      Status: PROVISIONAL

      Source sequence(s)
      DQ207750
      UniProtKB/TrEMBL
      Q1ADE8
      Related
      ENSBTAP00000019752.6, ENSBTAT00000019752.6
      Conserved Domains (4) summary
      pfam00520
      Location:15851824
      Ion_trans; Ion transport protein
      pfam08763
      Location:18971971
      Ca_chan_IQ; Voltage gated calcium channel IQ domain
      pfam10630
      Location:23322392
      DUF2476; Protein of unknown function (DUF2476)
      pfam16905
      Location:18321895
      GPHH; Voltage-dependent L-type calcium channel, IQ-associated

    RefSeqs of Annotated Genomes: Bos taurus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD1.2 Primary Assembly

    Genomic

    1. NC_037334.1 Reference ARS-UCD1.2 Primary Assembly

      Range
      12144008..12397316
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024993856.1XP_024849624.1  voltage-dependent P/Q-type calcium channel subunit alpha-1A isoform X9

      Conserved Domains (5) summary
      pfam00520
      Location:97371
      Ion_trans; Ion transport protein
      pfam08763
      Location:18721946
      Ca_chan_IQ; Voltage gated calcium channel IQ domain
      pfam16905
      Location:18001870
      GPHH; Voltage-dependent L-type calcium channel, IQ-associated
      cl28033
      Location:19732385
      Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region
      cl28310
      Location:768992
      Rho; Transcription termination factor Rho [Transcription]
    2. XM_024993848.1XP_024849616.1  voltage-dependent P/Q-type calcium channel subunit alpha-1A isoform X1

      Conserved Domains (5) summary
      pfam00520
      Location:15701827
      Ion_trans; Ion transport protein
      pfam08763
      Location:19001974
      Ca_chan_IQ; Voltage gated calcium channel IQ domain
      pfam16905
      Location:18281898
      GPHH; Voltage-dependent L-type calcium channel, IQ-associated
      cl28033
      Location:20012413
      Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region
      cl28310
      Location:768992
      Rho; Transcription termination factor Rho [Transcription]
    3. XM_024993854.1XP_024849622.1  voltage-dependent P/Q-type calcium channel subunit alpha-1A isoform X7

      Conserved Domains (5) summary
      pfam00520
      Location:15701827
      Ion_trans; Ion transport protein
      pfam08763
      Location:19001974
      Ca_chan_IQ; Voltage gated calcium channel IQ domain
      pfam16905
      Location:18281898
      GPHH; Voltage-dependent L-type calcium channel, IQ-associated
      cl28033
      Location:20012401
      Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region
      cl28310
      Location:768992
      Rho; Transcription termination factor Rho [Transcription]
    4. XM_024993849.1XP_024849617.1  voltage-dependent P/Q-type calcium channel subunit alpha-1A isoform X2

      Conserved Domains (5) summary
      pfam00520
      Location:15701827
      Ion_trans; Ion transport protein
      pfam08763
      Location:19001974
      Ca_chan_IQ; Voltage gated calcium channel IQ domain
      pfam16905
      Location:18281898
      GPHH; Voltage-dependent L-type calcium channel, IQ-associated
      cl28033
      Location:20012413
      Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region
      cl28310
      Location:768992
      Rho; Transcription termination factor Rho [Transcription]
    5. XM_024993855.1XP_024849623.1  voltage-dependent P/Q-type calcium channel subunit alpha-1A isoform X8

      Conserved Domains (5) summary
      pfam00520
      Location:15701827
      Ion_trans; Ion transport protein
      pfam08763
      Location:19001974
      Ca_chan_IQ; Voltage gated calcium channel IQ domain
      pfam16905
      Location:18281898
      GPHH; Voltage-dependent L-type calcium channel, IQ-associated
      cl28033
      Location:20012401
      Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region
      cl28310
      Location:768992
      Rho; Transcription termination factor Rho [Transcription]
    6. XM_024993851.1XP_024849619.1  voltage-dependent P/Q-type calcium channel subunit alpha-1A isoform X4

      Conserved Domains (5) summary
      pfam00520
      Location:15661823
      Ion_trans; Ion transport protein
      pfam08763
      Location:18961970
      Ca_chan_IQ; Voltage gated calcium channel IQ domain
      pfam16905
      Location:18241894
      GPHH; Voltage-dependent L-type calcium channel, IQ-associated
      cl28033
      Location:19972409
      Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region
      cl28310
      Location:768992
      Rho; Transcription termination factor Rho [Transcription]
    7. XM_024993852.1XP_024849620.1  voltage-dependent P/Q-type calcium channel subunit alpha-1A isoform X5

      Conserved Domains (5) summary
      pfam00520
      Location:15661823
      Ion_trans; Ion transport protein
      pfam08763
      Location:18961970
      Ca_chan_IQ; Voltage gated calcium channel IQ domain
      pfam16905
      Location:18241894
      GPHH; Voltage-dependent L-type calcium channel, IQ-associated
      cl28033
      Location:19972409
      Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region
      cl28310
      Location:768992
      Rho; Transcription termination factor Rho [Transcription]
    8. XM_024993858.1XP_024849626.1  voltage-dependent P/Q-type calcium channel subunit alpha-1A isoform X10

      Conserved Domains (5) summary
      pfam00520
      Location:15001757
      Ion_trans; Ion transport protein
      pfam08763
      Location:18301904
      Ca_chan_IQ; Voltage gated calcium channel IQ domain
      pfam16905
      Location:17581828
      GPHH; Voltage-dependent L-type calcium channel, IQ-associated
      cl28033
      Location:19312343
      Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region
      cl28310
      Location:698922
      Rho; Transcription termination factor Rho [Transcription]
    9. XM_024993850.1XP_024849618.1  voltage-dependent P/Q-type calcium channel subunit alpha-1A isoform X3

      Conserved Domains (5) summary
      pfam00520
      Location:15691826
      Ion_trans; Ion transport protein
      pfam08763
      Location:18991973
      Ca_chan_IQ; Voltage gated calcium channel IQ domain
      pfam16905
      Location:18271897
      GPHH; Voltage-dependent L-type calcium channel, IQ-associated
      cl28033
      Location:20002412
      Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region
      cl28310
      Location:767991
      Rho; Transcription termination factor Rho [Transcription]
    10. XM_024993853.1XP_024849621.1  voltage-dependent P/Q-type calcium channel subunit alpha-1A isoform X6

      Conserved Domains (5) summary
      pfam00520
      Location:15651822
      Ion_trans; Ion transport protein
      pfam08763
      Location:18951969
      Ca_chan_IQ; Voltage gated calcium channel IQ domain
      pfam16905
      Location:18231893
      GPHH; Voltage-dependent L-type calcium channel, IQ-associated
      cl28033
      Location:19962408
      Herpes_ICP4_C; Herpesvirus ICP4-like protein C-terminal region
      cl28310
      Location:767991
      Rho; Transcription termination factor Rho [Transcription]
    11. XM_024993859.1XP_024849627.1  voltage-dependent P/Q-type calcium channel subunit alpha-1A isoform X11

      Related
      ENSBTAP00000058208.1, ENSBTAT00000074041.1
      Conserved Domains (4) summary
      pfam00520
      Location:15701827
      Ion_trans; Ion transport protein
      pfam08763
      Location:19001974
      Ca_chan_IQ; Voltage gated calcium channel IQ domain
      pfam16905
      Location:18281898
      GPHH; Voltage-dependent L-type calcium channel, IQ-associated
      cl28310
      Location:768992
      Rho; Transcription termination factor Rho [Transcription]
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