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    tbc-20 TBC (Tre-2/Bub2/Cdc16) domain family [ Caenorhabditis elegans ]

    Gene ID: 175139, updated on 22-May-2018

    Summary

    Gene symbol
    tbc-20
    Gene description
    TBC (Tre-2/Bub2/Cdc16) domain family
    Primary source
    WormBase:WBGene00013196
    Locus tag
    CELE_Y54E2A.12
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis

    Genomic context

    See tbc-20 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    7
    Sequence:
    Chromosome: II; NC_003280.10 (14798486..14800650)

    Chromosome II - NC_003280.10Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene Eukaryotic translation initiation factor 3 subunit B Neighboring gene Receptor expression-enhancing protein;hypothetical protein Neighboring gene ncRNA Neighboring gene ncRNA

    Pathways from BioSystems

    General gene information

    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    GTPase activator activity IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Rab GTPase binding IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    Process Evidence Code Pubs
    ER to Golgi vesicle-mediated transport IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    positive regulation of GTPase activity IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    endoplasmic reticulum membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    PubMed 
    integral component of membrane IEA
    Inferred from Electronic Annotation
    more info
     
    membrane IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    TBC (Tre-2/Bub2/Cdc16) domain family
    NP_001293538.1
    • Product from WormBase gene class tbc;
      Confirmed by transcript evidence
    NP_497068.2
    • Product from WormBase gene class tbc;
      Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003280.10 Reference assembly

      Range
      14798486..14800650
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_064667.4NP_497068.2  TBC (Tre-2/Bub2/Cdc16) domain family [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_497068.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9XWI2
      Conserved Domains (1) summary
      pfam00566
      Location:146318
      RabGAP-TBC; Rab-GTPase-TBC domain
    2. NM_001306609.1NP_001293538.1  TBC (Tre-2/Bub2/Cdc16) domain family [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001293538.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      U4PB10
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