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    rc3h2 ring finger and CCCH-type domains 2 [ Stegastes partitus (bicolor damselfish) ]

    Gene ID: 103363377, updated on 9-Sep-2025
    Gene symbol
    rc3h2
    Gene description
    ring finger and CCCH-type domains 2
    See related
    Ensembl:ENSSPAG00000005233
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Stegastes partitus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Pomacentridae; Stegastes
    Orthologs
    all
    Try the new Gene page
    Try the new Transcripts and proteins table
    See rc3h2 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    21
    Annotation release Status Assembly Chr Location
    RS_2025_06 current Stegastes_partitus-1.0.2 (GCF_000690725.1) Unplaced Scaffold NW_007578387.1 (80953..116809, complement)

    NW_007578387.1Genomic Context describing neighboring genes Neighboring gene RAB GTPase activating protein 1 Neighboring gene probable G-protein coupled receptor 21 Neighboring gene zinc finger and BTB domain-containing protein 26 Neighboring gene Janus kinase 2a

    Genomic Sequence:
    NW_007578387 Unplaced Scaffold Reference Stegastes_partitus-1.0.2

    Go to nucleotide: Graphics FASTA GenBank

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA stem-loop binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables double-stranded RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables mRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ubiquitin protein ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein polyubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasmic stress granule IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Preferred Names
    roquin-2
    XP_008288338.1

    Length

    • 0
    XP_008288339.1

    Length

    • 0
    XP_008288340.1

    Length

    • 0
    XP_008288342.1

    Length

    • 0
    XP_008288343.1

    Length

    • 0
    XP_008288344.1

    Length

    • 0

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_000690725.1-RS_2025_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Stegastes_partitus-1.0.2

    Genomic

    1. NW_007578387.1 Reference Stegastes_partitus-1.0.2

      Range
      80953..116809 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_008290120.1 → XP_008288342.1  roquin-2 isoform X3

      UniProtKB/TrEMBL
      A0A9Y4N668
      Conserved Domains (2) summary
      pfam00642
      Location:409 → 433
      zf-CCCH; Zinc finger C-x8-C-x5-C-x3-H type (and similar)
      pfam14634
      Location:14 → 55
      zf-RING_5; zinc-RING finger domain

    2. XM_008290118.1 → XP_008288340.1  roquin-2 isoform X2

      UniProtKB/TrEMBL
      A0A9Y4K517
      Conserved Domains (2) summary
      pfam00642
      Location:411 → 435
      zf-CCCH; Zinc finger C-x8-C-x5-C-x3-H type (and similar)
      pfam14634
      Location:14 → 55
      zf-RING_5; zinc-RING finger domain

    3. XM_008290116.1 → XP_008288338.1  roquin-2 isoform X1

      See identical proteins and their annotated locations for XP_008288338.1

      UniProtKB/TrEMBL
      A0A3B4ZD67
      Related
      ENSSPAP00000006793.1, ENSSPAT00000006931.1
      Conserved Domains (2) summary
      pfam00642
      Location:411 → 435
      zf-CCCH; Zinc finger C-x8-C-x5-C-x3-H type (and similar)
      pfam14634
      Location:14 → 55
      zf-RING_5; zinc-RING finger domain

    4. XM_008290117.1 → XP_008288339.1  roquin-2 isoform X1

      See identical proteins and their annotated locations for XP_008288339.1

      UniProtKB/TrEMBL
      A0A3B4ZD67
      Conserved Domains (2) summary
      pfam00642
      Location:411 → 435
      zf-CCCH; Zinc finger C-x8-C-x5-C-x3-H type (and similar)
      pfam14634
      Location:14 → 55
      zf-RING_5; zinc-RING finger domain

    5. XM_008290121.1 → XP_008288343.1  roquin-2 isoform X4

      UniProtKB/TrEMBL
      A0A9Y4N9Q3
      Conserved Domains (2) summary
      pfam00642
      Location:411 → 435
      zf-CCCH; Zinc finger C-x8-C-x5-C-x3-H type (and similar)
      pfam14634
      Location:14 → 55
      zf-RING_5; zinc-RING finger domain

    6. XM_008290122.1 → XP_008288344.1  roquin-2 isoform X5

      UniProtKB/TrEMBL
      A0A9Y4N7Q3
      Conserved Domains (2) summary
      pfam00642
      Location:411 → 435
      zf-CCCH; Zinc finger C-x8-C-x5-C-x3-H type (and similar)
      pfam14634
      Location:14 → 55
      zf-RING_5; zinc-RING finger domain
    Nucleotide Protein
    Heading Accession and Version

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    Molecular Biology Databases