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    SHOC1 shortage in chiasmata 1 [ Canis lupus familiaris (dog) ]

    Gene ID: 100687399, updated on 17-Oct-2018

    Summary

    Official Symbol
    SHOC1provided by VGNC
    Official Full Name
    shortage in chiasmata 1provided by VGNC
    Primary source
    VGNC:VGNC:52491
    See related
    Ensembl:ENSCAFG00000003008
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Also known as
    C11H9orf84
    Orthologs

    Genomic context

    See SHOC1 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    27
    Annotation release Status Assembly Chr Location
    105 current CanFam3.1 (GCF_000002285.3) 11 NC_006593.3 (66283093..66359674, complement)

    Chromosome 11 - NC_006593.3Genomic Context describing neighboring genes Neighboring gene DnaJ heat shock protein family (Hsp40) member C25 Neighboring gene uncharacterized LOC106559503 Neighboring gene uncharacterized LOC111097882 Neighboring gene UDP-glucose ceramide glucosyltransferase Neighboring gene uncharacterized LOC111097883

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_006593.3 Chromosome 11 Reference CanFam3.1 Primary Assembly

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    General gene information

    Homology

    General protein information

    Preferred Names
    protein shortage in chiasmata 1 ortholog; uncharacterized protein C9orf84 homolog
    Names
    chromosome 11 C9orf84 homolog

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 105 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference CanFam3.1 Primary Assembly

    Genomic

    1. NC_006593.3 Reference CanFam3.1 Primary Assembly

      Range
      66283093..66359674 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_014117920.2XP_013973395.2  uncharacterized protein C9orf84 homolog isoform X1

      Related
      ENSCAFP00000033228.2, ENSCAFT00000037679.3
    2. XM_022424937.1XP_022280645.1  uncharacterized protein C9orf84 homolog isoform X2

      Related
      ENSCAFP00000033237.2, ENSCAFT00000037683.3
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