Format

Send to:

Choose Destination
    • Showing Current items.

    P2RX5-TAX1BP3 P2RX5-TAX1BP3 readthrough (NMD candidate) [ Homo sapiens (human) ]

    Gene ID: 100533970, updated on 11-Jun-2021

    Summary

    Official Symbol
    P2RX5-TAX1BP3provided by HGNC
    Official Full Name
    P2RX5-TAX1BP3 readthrough (NMD candidate)provided by HGNC
    Primary source
    HGNC:HGNC:49191
    See related
    Ensembl:ENSG00000257950
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    P2X5; P2RX5
    Summary
    This locus represents naturally occurring read-through transcription between the neighboring P2RX5 (purinergic receptor P2X, ligand-gated ion channel, 5) and TAX1BP3 (Tax1 binding protein 3) genes on chromosome 17. The read-through transcript is a candidate for nonsense-mediated mRNA decay (NMD), and is thus unlikely to produce a protein product. [provided by RefSeq, Mar 2011]
    Expression
    Ubiquitous expression in stomach (RPKM 14.5), lymph node (RPKM 14.1) and 25 other tissues See more
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See P2RX5-TAX1BP3 in Genome Data Viewer
    Location:
    17p13.2
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    109.20210514 current GRCh38.p13 (GCF_000001405.39) 17 NC_000017.11 (3662893..3696404, complement)
    105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (3566187..3599698, complement)

    Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105371493 Neighboring gene uncharacterized LOC105371492 Neighboring gene cystinosin, lysosomal cystine transporter Neighboring gene ribosomal protein L21 pseudogene 125 Neighboring gene Tax1 binding protein 3 Neighboring gene ER membrane protein complex subunit 6 Neighboring gene purinergic receptor P2X 5 Neighboring gene integrin subunit alpha E Neighboring gene histone H3 associated protein kinase Neighboring gene nonconserved acetylation island sequence 85 enhancer

    Genomic regions, transcripts, and products

    Expression

    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Markers

    Other Names

    • ATP receptor
    • P2X purinoceptor 5
    • Purinergic receptor

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_037928.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AB209623, AC027796, AC132942
      Related
      ENST00000550383.1

    RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20210514

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p13 Primary Assembly

    Genomic

    1. NC_000017.11 Reference GRCh38.p13 Primary Assembly

      Range
      3662893..3696404 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Support Center