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    ppme1 protein phosphatase methylesterase 1 [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 100495664, updated on 20-Jun-2018

    Summary

    Symbol
    ppme1provided by Xenbase
    Full Name
    protein phosphatase methylesterase 1provided by Xenbase
    Primary source
    Xenbase:XB-GENE-979838
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Orthologs

    Genomic context

    See ppme1 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    103 current Xenopus_tropicalis_v9.1 (GCF_000004195.3) Unplaced Scaffold NW_016683590.1 (10417..29576, complement)
    102 previous assembly Xtropicalis_v7 (GCF_000004195.2) Unplaced Scaffold NW_004668233.1 (141209081..141228097)

    NW_016683590.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101733624 Neighboring gene C2 calcium-dependent domain containing 3 Neighboring gene uncoupling protein 3 (mitochondrial, proton carrier)

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    General gene information

    Homology

    General protein information

    Preferred Names
    protein phosphatase methylesterase 1

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_tropicalis_v9.1 Primary Assembly

    Genomic

    1. NW_016683590.1 Reference Xenopus_tropicalis_v9.1 Primary Assembly

      Range
      10417..29576 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002942520.4XP_002942566.1  protein phosphatase methylesterase 1

      See identical proteins and their annotated locations for XP_002942566.1

      Conserved Domains (2) summary
      COG0596
      Location:64372
      MhpC; Pimeloyl-ACP methyl ester carboxylesterase [Coenzyme transport and metabolism, General function prediction only]
      pfam12695
      Location:76167
      Abhydrolase_5; Alpha/beta hydrolase family
    2. XM_012958074.2XP_012813528.1  protein phosphatase methylesterase 1

      See identical proteins and their annotated locations for XP_012813528.1

      Conserved Domains (2) summary
      COG0596
      Location:64372
      MhpC; Pimeloyl-ACP methyl ester carboxylesterase [Coenzyme transport and metabolism, General function prediction only]
      pfam12695
      Location:76167
      Abhydrolase_5; Alpha/beta hydrolase family
    3. XM_012958075.2XP_012813529.1  protein phosphatase methylesterase 1

      See identical proteins and their annotated locations for XP_012813529.1

      Conserved Domains (2) summary
      COG0596
      Location:64372
      MhpC; Pimeloyl-ACP methyl ester carboxylesterase [Coenzyme transport and metabolism, General function prediction only]
      pfam12695
      Location:76167
      Abhydrolase_5; Alpha/beta hydrolase family
    4. XM_012958077.2XP_012813531.1  protein phosphatase methylesterase 1

      See identical proteins and their annotated locations for XP_012813531.1

      Conserved Domains (2) summary
      COG0596
      Location:64372
      MhpC; Pimeloyl-ACP methyl ester carboxylesterase [Coenzyme transport and metabolism, General function prediction only]
      pfam12695
      Location:76167
      Abhydrolase_5; Alpha/beta hydrolase family
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