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    ano6 anoctamin 6 [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 100486935, updated on 20-Jun-2018

    Summary

    Symbol
    ano6provided by Xenbase
    Full Name
    anoctamin 6provided by Xenbase
    Primary source
    Xenbase:XB-GENE-982324
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Also known as
    tmem16f
    Orthologs

    Genomic context

    See ano6 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    22
    Annotation release Status Assembly Chr Location
    103 current Xenopus_tropicalis_v9.1 (GCF_000004195.3) 3 NC_030679.1 (54420250..54514988, complement)
    102 previous assembly Xtropicalis_v7 (GCF_000004195.2) Unplaced Scaffold NW_004668234.1 (92475198..92570367, complement)

    Chromosome 3 - NC_030679.1Genomic Context describing neighboring genes Neighboring gene SR-related CTD-associated factor 11 Neighboring gene AT-rich interaction domain 2 Neighboring gene developing brain homeobox 2 Neighboring gene neural EGFL like 2 Neighboring gene transmembrane protein 117

    Genomic regions, transcripts, and products

    Bibliography

    GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

    Pathways from BioSystems

    General gene information

    Homology

    NCBI Reference Sequences (RefSeq)

    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_tropicalis_v9.1 Primary Assembly

    Genomic

    1. NC_030679.1 Reference Xenopus_tropicalis_v9.1 Primary Assembly

      Range
      54420250..54514988 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_012959928.2XP_012815382.1  anoctamin-6 isoform X3

      Conserved Domains (2) summary
      pfam04547
      Location:258843
      Anoctamin; Calcium-activated chloride channel
      pfam16178
      Location:35255
      Anoct_dimer; Dimerization domain of Ca+-activated chloride-channel, anoctamin
    2. XM_012959927.2XP_012815381.1  anoctamin-6 isoform X2

      Conserved Domains (2) summary
      pfam04547
      Location:270855
      Anoctamin; Calcium-activated chloride channel
      pfam16178
      Location:47267
      Anoct_dimer; Dimerization domain of Ca+-activated chloride-channel, anoctamin
    3. XM_002932807.4XP_002932853.1  anoctamin-6 isoform X1

      Conserved Domains (2) summary
      pfam04547
      Location:285870
      Anoctamin; Calcium-activated chloride channel
      pfam16178
      Location:62282
      Anoct_dimer; Dimerization domain of Ca+-activated chloride-channel, anoctamin
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