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    zcchc8 zinc finger CCHC-type containing 8 [ Xenopus tropicalis (tropical clawed frog) ]

    Gene ID: 100216122, updated on 20-Jun-2018

    Summary

    Official Symbol
    zcchc8provided by Xenbase
    Official Full Name
    zinc finger CCHC-type containing 8provided by Xenbase
    Primary source
    Xenbase:XB-GENE-977402
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus tropicalis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
    Orthologs

    Genomic context

    See zcchc8 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    103 current Xenopus_tropicalis_v9.1 (GCF_000004195.3) 1 NC_030677.1 (153084414..153104284)
    102 previous assembly Xtropicalis_v7 (GCF_000004195.2) Unplaced Scaffold NW_004668232.1 (46319458..46339328, complement)

    Chromosome 1 - NC_030677.1Genomic Context describing neighboring genes Neighboring gene kinetochore associated 1 Neighboring gene arginine/serine-rich coiled-coil 2 Neighboring gene CAP-Gly domain containing linker protein 1 Neighboring gene hydroxycarboxylic acid receptor 2-like

    Genomic regions, transcripts, and products

    General gene information

    Homology

    General protein information

    Preferred Names
    zinc finger CCHC domain-containing protein 8
    Names
    zinc finger, CCHC domain containing 8

    NCBI Reference Sequences (RefSeq)

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001142101.1NP_001135573.1  zinc finger CCHC domain-containing protein 8

      See identical proteins and their annotated locations for NP_001135573.1

      Status: PROVISIONAL

      Source sequence(s)
      BC168078
      UniProtKB/TrEMBL
      B4F702
      Conserved Domains (2) summary
      pfam00098
      Location:215232
      zf-CCHC; Zinc knuckle
      cl02643
      Location:270322
      PSP; PSP

    RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_tropicalis_v9.1 Primary Assembly

    Genomic

    1. NC_030677.1 Reference Xenopus_tropicalis_v9.1 Primary Assembly

      Range
      153084414..153104284
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_012957455.1XP_012812909.1  zinc finger CCHC domain-containing protein 8 isoform X1

      Conserved Domains (2) summary
      smart00343
      Location:128144
      ZnF_C2HC; zinc finger
      cl02643
      Location:182234
      PSP; PSP
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