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    hbl1 hexose-binding lectin 1 [ Danio rerio (zebrafish) ]

    Gene ID: 100007982, updated on 9-Apr-2018
    Official Symbol
    hbl1provided by ZNC
    Official Full Name
    hexose-binding lectin 1provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-070912-285
    See related
    Ensembl:ENSDARG00000068221 Vega:OTTDARG00000025101
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Danio
    Also known as
    si:ch211-284o19.2
    Location:
    chromosome: 2
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 2 NC_007113.7 (37894849..37897046, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 2 NC_007113.6 (37912391..37914536, complement)

    Chromosome 2 - NC_007113.7Genomic Context describing neighboring genes Neighboring gene mannose binding lectin 2 Neighboring gene hexose-binding lectin 2 Neighboring gene telomerase-associated protein 1 Neighboring gene complement C1q-like protein 3 Neighboring gene cerebellin 10

    Homology

    Gene Ontology Provided by ZFIN

    Function Evidence Code Pubs
    carbohydrate binding IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    mannose binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    complement activation, lectin pathway IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    collagen trimer IEA
    Inferred from Electronic Annotation
    more info
     

    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007113.7 Reference GRCz11 Primary Assembly

      Range
      37894849..37897046 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001341879.6XP_001341915.2  mannose-binding protein C isoform X2

      Conserved Domains (1) summary
      cl02432
      Location:177293
      CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
    2. XM_009298673.3XP_009296948.2  mannose-binding protein C isoform X1

      Related
      ENSDARP00000110218.2, ENSDART00000129852.3
      Conserved Domains (1) summary
      cl02432
      Location:178294
      CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain

    Reference GRCz11 ALT_DRER_TU_1

    Genomic

    1. NW_018394505.1 Reference GRCz11 ALT_DRER_TU_1

      Range
      92141..94424 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_021471256.1XP_021326931.1  mannose-binding protein C isoform X2

      Conserved Domains (1) summary
      cl02432
      Location:177293
      CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
    2. XM_021471255.1XP_021326930.1  mannose-binding protein C isoform X1

      Conserved Domains (1) summary
      cl02432
      Location:178294
      CLECT; C-type lectin (CTL)/C-type lectin-like (CTLD) domain
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